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A Review of Feature Selection and Feature Extraction Methods Applied on Microarray Data
We summarise various ways of performing dimensionality reduction on high-dimensional microarray data. Many different feature selection and feature extraction methods exist and they are being widely used. All these methods aim to remove redundant and irrelevant features so that classification of new...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4480804/ https://www.ncbi.nlm.nih.gov/pubmed/26170834 http://dx.doi.org/10.1155/2015/198363 |
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author | Hira, Zena M. Gillies, Duncan F. |
author_facet | Hira, Zena M. Gillies, Duncan F. |
author_sort | Hira, Zena M. |
collection | PubMed |
description | We summarise various ways of performing dimensionality reduction on high-dimensional microarray data. Many different feature selection and feature extraction methods exist and they are being widely used. All these methods aim to remove redundant and irrelevant features so that classification of new instances will be more accurate. A popular source of data is microarrays, a biological platform for gathering gene expressions. Analysing microarrays can be difficult due to the size of the data they provide. In addition the complicated relations among the different genes make analysis more difficult and removing excess features can improve the quality of the results. We present some of the most popular methods for selecting significant features and provide a comparison between them. Their advantages and disadvantages are outlined in order to provide a clearer idea of when to use each one of them for saving computational time and resources. |
format | Online Article Text |
id | pubmed-4480804 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-44808042015-07-13 A Review of Feature Selection and Feature Extraction Methods Applied on Microarray Data Hira, Zena M. Gillies, Duncan F. Adv Bioinformatics Review Article We summarise various ways of performing dimensionality reduction on high-dimensional microarray data. Many different feature selection and feature extraction methods exist and they are being widely used. All these methods aim to remove redundant and irrelevant features so that classification of new instances will be more accurate. A popular source of data is microarrays, a biological platform for gathering gene expressions. Analysing microarrays can be difficult due to the size of the data they provide. In addition the complicated relations among the different genes make analysis more difficult and removing excess features can improve the quality of the results. We present some of the most popular methods for selecting significant features and provide a comparison between them. Their advantages and disadvantages are outlined in order to provide a clearer idea of when to use each one of them for saving computational time and resources. Hindawi Publishing Corporation 2015 2015-06-11 /pmc/articles/PMC4480804/ /pubmed/26170834 http://dx.doi.org/10.1155/2015/198363 Text en Copyright © 2015 Z. M. Hira and D. F. Gillies. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Review Article Hira, Zena M. Gillies, Duncan F. A Review of Feature Selection and Feature Extraction Methods Applied on Microarray Data |
title | A Review of Feature Selection and Feature Extraction Methods Applied on Microarray Data |
title_full | A Review of Feature Selection and Feature Extraction Methods Applied on Microarray Data |
title_fullStr | A Review of Feature Selection and Feature Extraction Methods Applied on Microarray Data |
title_full_unstemmed | A Review of Feature Selection and Feature Extraction Methods Applied on Microarray Data |
title_short | A Review of Feature Selection and Feature Extraction Methods Applied on Microarray Data |
title_sort | review of feature selection and feature extraction methods applied on microarray data |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4480804/ https://www.ncbi.nlm.nih.gov/pubmed/26170834 http://dx.doi.org/10.1155/2015/198363 |
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