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BGD: A Database of Bat Genomes

Bats account for ~20% of mammalian species, and are the only mammals with true powered flight. For the sake of their specialized phenotypic traits, many researches have been devoted to examine the evolution of bats. Until now, some whole genome sequences of bats have been assembled and annotated, ho...

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Detalles Bibliográficos
Autores principales: Fang, Jianfei, Wang, Xuan, Mu, Shuo, Zhang, Shuyi, Dong, Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4482021/
https://www.ncbi.nlm.nih.gov/pubmed/26110276
http://dx.doi.org/10.1371/journal.pone.0131296
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author Fang, Jianfei
Wang, Xuan
Mu, Shuo
Zhang, Shuyi
Dong, Dong
author_facet Fang, Jianfei
Wang, Xuan
Mu, Shuo
Zhang, Shuyi
Dong, Dong
author_sort Fang, Jianfei
collection PubMed
description Bats account for ~20% of mammalian species, and are the only mammals with true powered flight. For the sake of their specialized phenotypic traits, many researches have been devoted to examine the evolution of bats. Until now, some whole genome sequences of bats have been assembled and annotated, however, a uniform resource for the annotated bat genomes is still unavailable. To make the extensive data associated with the bat genomes accessible to the general biological communities, we established a Bat Genome Database (BGD). BGD is an open-access, web-available portal that integrates available data of bat genomes and genes. It hosts data from six bat species, including two megabats and four microbats. Users can query the gene annotations using efficient searching engine, and it offers browsable tracks of bat genomes. Furthermore, an easy-to-use phylogenetic analysis tool was also provided to facilitate online phylogeny study of genes. To the best of our knowledge, BGD is the first database of bat genomes. It will extend our understanding of the bat evolution and be advantageous to the bat sequences analysis. BGD is freely available at: http://donglab.ecnu.edu.cn/databases/BatGenome/.
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spelling pubmed-44820212015-07-01 BGD: A Database of Bat Genomes Fang, Jianfei Wang, Xuan Mu, Shuo Zhang, Shuyi Dong, Dong PLoS One Research Article Bats account for ~20% of mammalian species, and are the only mammals with true powered flight. For the sake of their specialized phenotypic traits, many researches have been devoted to examine the evolution of bats. Until now, some whole genome sequences of bats have been assembled and annotated, however, a uniform resource for the annotated bat genomes is still unavailable. To make the extensive data associated with the bat genomes accessible to the general biological communities, we established a Bat Genome Database (BGD). BGD is an open-access, web-available portal that integrates available data of bat genomes and genes. It hosts data from six bat species, including two megabats and four microbats. Users can query the gene annotations using efficient searching engine, and it offers browsable tracks of bat genomes. Furthermore, an easy-to-use phylogenetic analysis tool was also provided to facilitate online phylogeny study of genes. To the best of our knowledge, BGD is the first database of bat genomes. It will extend our understanding of the bat evolution and be advantageous to the bat sequences analysis. BGD is freely available at: http://donglab.ecnu.edu.cn/databases/BatGenome/. Public Library of Science 2015-06-25 /pmc/articles/PMC4482021/ /pubmed/26110276 http://dx.doi.org/10.1371/journal.pone.0131296 Text en © 2015 Fang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Fang, Jianfei
Wang, Xuan
Mu, Shuo
Zhang, Shuyi
Dong, Dong
BGD: A Database of Bat Genomes
title BGD: A Database of Bat Genomes
title_full BGD: A Database of Bat Genomes
title_fullStr BGD: A Database of Bat Genomes
title_full_unstemmed BGD: A Database of Bat Genomes
title_short BGD: A Database of Bat Genomes
title_sort bgd: a database of bat genomes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4482021/
https://www.ncbi.nlm.nih.gov/pubmed/26110276
http://dx.doi.org/10.1371/journal.pone.0131296
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