Cargando…
The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna
BACKGROUND: One of the basic premises of drawing samples from populations is that the samples are representative of the populations. However, error in sampling is poorly recognized, and it goes unnoticed especially in community ecology. By combining traditional open quadrats used for sampling forest...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4482038/ https://www.ncbi.nlm.nih.gov/pubmed/26112641 http://dx.doi.org/10.1186/s12898-015-0049-5 |
_version_ | 1782378372938072064 |
---|---|
author | Surendran, Harikrishnan Vasudevan, Karthikeyan |
author_facet | Surendran, Harikrishnan Vasudevan, Karthikeyan |
author_sort | Surendran, Harikrishnan |
collection | PubMed |
description | BACKGROUND: One of the basic premises of drawing samples from populations is that the samples are representative of the populations. However, error in sampling is poorly recognized, and it goes unnoticed especially in community ecology. By combining traditional open quadrats used for sampling forest floor herpetofauna with intensive bounded quadrats, we explore the effect of sampling error on estimates of species richness, diversity, and density in the Andaman Islands. RESULTS: Fisher’s α measure of species diversity and second order jackknife estimate of species richness were not sensitive to number of individuals sampled. Sampling error resulted in underestimation of density in both frogs and lizards. It influenced relative abundance of individual species resulting in underestimation of abundance of small or camouflaged species; and also resulted in low precision in lizard species richness estimates. CONCLUSIONS: Sampling error resulted in underestimation of abundance of small, fossorial or camouflaged species. Imperfect detection from less intensive sampling method results incorrect estimates of abundance of herpetofauna. Fisher’s α for species diversity and second order jackknife for species richness were robust measures. These have strong implications on inferences made from previous studies as well as sampling strategies for future studies. It is essential that these shortfalls are accounted for while communities are sampled or when datasets are compared. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12898-015-0049-5) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4482038 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-44820382015-06-27 The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna Surendran, Harikrishnan Vasudevan, Karthikeyan BMC Ecol Methodology Article BACKGROUND: One of the basic premises of drawing samples from populations is that the samples are representative of the populations. However, error in sampling is poorly recognized, and it goes unnoticed especially in community ecology. By combining traditional open quadrats used for sampling forest floor herpetofauna with intensive bounded quadrats, we explore the effect of sampling error on estimates of species richness, diversity, and density in the Andaman Islands. RESULTS: Fisher’s α measure of species diversity and second order jackknife estimate of species richness were not sensitive to number of individuals sampled. Sampling error resulted in underestimation of density in both frogs and lizards. It influenced relative abundance of individual species resulting in underestimation of abundance of small or camouflaged species; and also resulted in low precision in lizard species richness estimates. CONCLUSIONS: Sampling error resulted in underestimation of abundance of small, fossorial or camouflaged species. Imperfect detection from less intensive sampling method results incorrect estimates of abundance of herpetofauna. Fisher’s α for species diversity and second order jackknife for species richness were robust measures. These have strong implications on inferences made from previous studies as well as sampling strategies for future studies. It is essential that these shortfalls are accounted for while communities are sampled or when datasets are compared. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12898-015-0049-5) contains supplementary material, which is available to authorized users. BioMed Central 2015-06-26 /pmc/articles/PMC4482038/ /pubmed/26112641 http://dx.doi.org/10.1186/s12898-015-0049-5 Text en © Surendran and Vasudevan 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Methodology Article Surendran, Harikrishnan Vasudevan, Karthikeyan The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna |
title | The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna |
title_full | The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna |
title_fullStr | The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna |
title_full_unstemmed | The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna |
title_short | The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna |
title_sort | devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna |
topic | Methodology Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4482038/ https://www.ncbi.nlm.nih.gov/pubmed/26112641 http://dx.doi.org/10.1186/s12898-015-0049-5 |
work_keys_str_mv | AT surendranharikrishnan thedevilisinthedetailestimatingspeciesrichnessdensityandrelativeabundanceoftropicalislandherpetofauna AT vasudevankarthikeyan thedevilisinthedetailestimatingspeciesrichnessdensityandrelativeabundanceoftropicalislandherpetofauna AT surendranharikrishnan devilisinthedetailestimatingspeciesrichnessdensityandrelativeabundanceoftropicalislandherpetofauna AT vasudevankarthikeyan devilisinthedetailestimatingspeciesrichnessdensityandrelativeabundanceoftropicalislandherpetofauna |