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The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna

BACKGROUND: One of the basic premises of drawing samples from populations is that the samples are representative of the populations. However, error in sampling is poorly recognized, and it goes unnoticed especially in community ecology. By combining traditional open quadrats used for sampling forest...

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Autores principales: Surendran, Harikrishnan, Vasudevan, Karthikeyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4482038/
https://www.ncbi.nlm.nih.gov/pubmed/26112641
http://dx.doi.org/10.1186/s12898-015-0049-5
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author Surendran, Harikrishnan
Vasudevan, Karthikeyan
author_facet Surendran, Harikrishnan
Vasudevan, Karthikeyan
author_sort Surendran, Harikrishnan
collection PubMed
description BACKGROUND: One of the basic premises of drawing samples from populations is that the samples are representative of the populations. However, error in sampling is poorly recognized, and it goes unnoticed especially in community ecology. By combining traditional open quadrats used for sampling forest floor herpetofauna with intensive bounded quadrats, we explore the effect of sampling error on estimates of species richness, diversity, and density in the Andaman Islands. RESULTS: Fisher’s α measure of species diversity and second order jackknife estimate of species richness were not sensitive to number of individuals sampled. Sampling error resulted in underestimation of density in both frogs and lizards. It influenced relative abundance of individual species resulting in underestimation of abundance of small or camouflaged species; and also resulted in low precision in lizard species richness estimates. CONCLUSIONS: Sampling error resulted in underestimation of abundance of small, fossorial or camouflaged species. Imperfect detection from less intensive sampling method results incorrect estimates of abundance of herpetofauna. Fisher’s α for species diversity and second order jackknife for species richness were robust measures. These have strong implications on inferences made from previous studies as well as sampling strategies for future studies. It is essential that these shortfalls are accounted for while communities are sampled or when datasets are compared. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12898-015-0049-5) contains supplementary material, which is available to authorized users.
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spelling pubmed-44820382015-06-27 The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna Surendran, Harikrishnan Vasudevan, Karthikeyan BMC Ecol Methodology Article BACKGROUND: One of the basic premises of drawing samples from populations is that the samples are representative of the populations. However, error in sampling is poorly recognized, and it goes unnoticed especially in community ecology. By combining traditional open quadrats used for sampling forest floor herpetofauna with intensive bounded quadrats, we explore the effect of sampling error on estimates of species richness, diversity, and density in the Andaman Islands. RESULTS: Fisher’s α measure of species diversity and second order jackknife estimate of species richness were not sensitive to number of individuals sampled. Sampling error resulted in underestimation of density in both frogs and lizards. It influenced relative abundance of individual species resulting in underestimation of abundance of small or camouflaged species; and also resulted in low precision in lizard species richness estimates. CONCLUSIONS: Sampling error resulted in underestimation of abundance of small, fossorial or camouflaged species. Imperfect detection from less intensive sampling method results incorrect estimates of abundance of herpetofauna. Fisher’s α for species diversity and second order jackknife for species richness were robust measures. These have strong implications on inferences made from previous studies as well as sampling strategies for future studies. It is essential that these shortfalls are accounted for while communities are sampled or when datasets are compared. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12898-015-0049-5) contains supplementary material, which is available to authorized users. BioMed Central 2015-06-26 /pmc/articles/PMC4482038/ /pubmed/26112641 http://dx.doi.org/10.1186/s12898-015-0049-5 Text en © Surendran and Vasudevan 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Methodology Article
Surendran, Harikrishnan
Vasudevan, Karthikeyan
The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna
title The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna
title_full The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna
title_fullStr The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna
title_full_unstemmed The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna
title_short The devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna
title_sort devil is in the detail: estimating species richness, density, and relative abundance of tropical island herpetofauna
topic Methodology Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4482038/
https://www.ncbi.nlm.nih.gov/pubmed/26112641
http://dx.doi.org/10.1186/s12898-015-0049-5
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