Cargando…

Intracerebral Hemorrhage and Ischemic Stroke of Different Etiologies Have Distinct Alternatively Spliced mRNA Profiles in the Blood: a Pilot RNA-seq Study

Whole transcriptome studies have used 3′-biased expression microarrays to study genes regulated in the blood of stroke patients. However, alternatively spliced messenger RNA isoforms have not been investigated for ischemic stroke or intracerebral hemorrhage (ICH) in animals or humans. Alternative sp...

Descripción completa

Detalles Bibliográficos
Autores principales:	Dykstra-Aiello, Cheryl, Jickling, Glen C., Ander, Bradley P., Zhan, Xinhua, Liu, DaZhi, Hull, Heather, Orantia, Miles, Ho, Carolyn, Stamova, Boryana
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Springer US 2015
Materias:	Brief Communication
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4485700/ https://www.ncbi.nlm.nih.gov/pubmed/25994285 http://dx.doi.org/10.1007/s12975-015-0407-9

Ejemplares similares

Alternative Splicing of Putative Stroke/Vascular Risk Factor Genes Expressed in Blood Following Ischemic Stroke Is Sexually Dimorphic and Cause-Specific
por: Dykstra-Aiello, Cheryl, et al.
Publicado: (2020)

Elevating microRNA-122 in blood improves outcomes after temporary middle cerebral artery occlusion in rats
por: Liu, Da Zhi, et al.
Publicado: (2015)

microRNA Expression in Peripheral Blood Cells following Acute Ischemic Stroke and Their Predicted Gene Targets
por: Jickling, Glen C., et al.
Publicado: (2014)

Molecular Correlates of Hemorrhage and Edema Volumes Following Human Intracerebral Hemorrhage Implicate Inflammation, Autophagy, mRNA Splicing, and T Cell Receptor Signaling
por: Durocher, Marc, et al.
Publicado: (2020)

Molecular markers and mechanisms of stroke: RNA studies of blood in animals and humans
por: Sharp, Frank R, et al.
Publicado: (2011)

MicroRNA and mRNA Expression Changes in Steroid Naïve and Steroid Treated DMD Patients
por: Liu, Da Zhi, et al.
Publicado: (2015)

Inflammation Combined with Ischemia Produces Myelin Injury and Plaque-Like Aggregates of Myelin, Amyloid-β and AβPP in Adult Rat Brain
por: Zhan, Xinhua, et al.
Publicado: (2015)

Inflammatory, regulatory, and autophagy co-expression modules and hub genes underlie the peripheral immune response to human intracerebral hemorrhage
por: Durocher, Marc, et al.
Publicado: (2019)

Gene expression changes implicate specific peripheral immune responses to Deep and Lobar Intracerebral Hemorrhages in humans
por: Knepp, Bodie, et al.
Publicado: (2022)

mRNA Expression Profiles from Whole Blood Associated with Vasospasm in Patients with Subarachnoid Hemorrhage
por: Xu, Huichun, et al.
Publicado: (2019)

Smoking affects gene expression in blood of patients with ischemic stroke
por: Cheng, Xiyuan, et al.
Publicado: (2019)

Gene Expression in Peripheral Immune Cells following Cardioembolic Stroke Is Sexually Dimorphic
por: Stamova, Boryana, et al.
Publicado: (2014)

Monocyte, neutrophil, and whole blood transcriptome dynamics following ischemic stroke
por: Carmona-Mora, Paulina, et al.
Publicado: (2023)

Bacterial lipopolysaccharide is associated with stroke
por: Hakoupian, Marisa, et al.
Publicado: (2021)

Genome response to tissue plasminogen activator in experimental ischemic stroke
por: Jickling, Glen C, et al.
Publicado: (2010)

Genetic variation contributes to gene expression response in ischemic stroke: an eQTL study
por: Amini, Hajar, et al.
Publicado: (2020)

Early peripheral blood gene expression associated with good and poor 90-day ischemic stroke outcomes
por: Amini, Hajar, et al.
Publicado: (2023)

Possible sexually dimorphic role of miRNA and other sncRNA in ASD brain
por: Schumann, Cynthia M., et al.
Publicado: (2017)

Lipopolysaccharide Associates with Amyloid Plaques, Neurons and Oligodendrocytes in Alzheimer’s Disease Brain: A Review
por: Zhan, Xinhua, et al.
Publicado: (2018)

Atypical miRNA expression in temporal cortex associated with dysregulation of immune, cell cycle, and other pathways in autism spectrum disorders
por: Ander, Bradley P., et al.
Publicado: (2015)

Specific Regional and Age-Related Small Noncoding RNA Expression Patterns Within Superior Temporal Gyrus of Typical Human Brains Are Less Distinct in Autism Brains
por: Stamova, Boryana, et al.
Publicado: (2015)

Identification and validation of suitable endogenous reference genes for gene expression studies in human peripheral blood
por: Stamova, Boryana S, et al.
Publicado: (2009)

Correlations of gene expression with ratings of inattention and hyperactivity/impulsivity in tourette syndrome: a pilot study
por: Tian, Yingfang, et al.
Publicado: (2012)

Supersplat—spliced RNA-seq alignment
por: Bryant, Douglas W., et al.
Publicado: (2010)

ARH-seq: identification of differential splicing in RNA-seq data
por: Rasche, Axel, et al.
Publicado: (2014)

Detection and visualization of differential splicing in RNA-Seq data with JunctionSeq
por: Hartley, Stephen W., et al.
Publicado: (2016)

RNA splicing analysis using heterogeneous and large RNA-seq datasets
por: Vaquero-Garcia, Jorge, et al.
Publicado: (2023)

TopHat: discovering splice junctions with RNA-Seq
por: Trapnell, Cole, et al.
Publicado: (2009)

Mapping Splicing Quantitative Trait Loci in RNA-Seq
por: Jia, Cheng, et al.
Publicado: (2014)

Mapping Splicing Quantitative Trait Loci in RNA-Seq
por: Jia, Cheng, et al.
Publicado: (2015)

Massively parallel RNA device engineering in mammalian cells with RNA-Seq
por: Xiang, Joy S., et al.
Publicado: (2019)

Gram-negative bacterial molecules associate with Alzheimer disease pathology
por: Zhan, Xinhua, et al.
Publicado: (2016)

MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery
por: Wang, Kai, et al.
Publicado: (2010)

DiffSplice: the genome-wide detection of differential splicing events with RNA-seq
por: Hu, Yin, et al.
Publicado: (2013)

Inference of alternative splicing from RNA-Seq data with probabilistic splice graphs
por: LeGault, Laura H., et al.
Publicado: (2013)

SpliceSeq: a resource for analysis and visualization of RNA-Seq data on alternative splicing and its functional impacts
por: Ryan, Michael C., et al.
Publicado: (2012)

Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm
por: Romero, Juan P., et al.
Publicado: (2018)

Detection of splice junctions from paired-end RNA-seq data by SpliceMap
por: Au, Kin Fai, et al.
Publicado: (2010)

Evidence for differential alternative splicing in blood of young boys with autism spectrum disorders
por: Stamova, Boryana S, et al.
Publicado: (2013)

Prediction and Quantification of Splice Events from RNA-Seq Data
por: Goldstein, Leonard D., et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_mn39mdkjmjob274u376i96rfmu