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The extension of total gain (TG) statistic in survival models: properties and applications

BACKGROUND: The results of multivariable regression models are usually summarized in the form of parameter estimates for the covariates, goodness-of-fit statistics, and the relevant p-values. These statistics do not inform us about whether covariate information will lead to any substantial improveme...

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Autores principales: Choodari-Oskooei, Babak, Royston, Patrick, Parmar, Mahesh K.B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4486698/
https://www.ncbi.nlm.nih.gov/pubmed/26126418
http://dx.doi.org/10.1186/s12874-015-0042-x
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author Choodari-Oskooei, Babak
Royston, Patrick
Parmar, Mahesh K.B.
author_facet Choodari-Oskooei, Babak
Royston, Patrick
Parmar, Mahesh K.B.
author_sort Choodari-Oskooei, Babak
collection PubMed
description BACKGROUND: The results of multivariable regression models are usually summarized in the form of parameter estimates for the covariates, goodness-of-fit statistics, and the relevant p-values. These statistics do not inform us about whether covariate information will lead to any substantial improvement in prediction. Predictive ability measures can be used for this purpose since they provide important information about the practical significance of prognostic factors. R(2)-type indices are the most familiar forms of such measures in survival models, but they all have limitations and none is widely used. METHODS: In this paper, we extend the total gain (TG) measure, proposed for a logistic regression model, to survival models and explore its properties using simulations and real data. TG is based on the binary regression quantile plot, otherwise known as the predictiveness curve. Standardised TG ranges from 0 (no explanatory power) to 1 (‘perfect’ explanatory power). RESULTS: The results of our simulations show that unlike many of the other R(2)-type predictive ability measures, TG is independent of random censoring. It increases as the effect of a covariate increases and can be applied to different types of survival models, including models with time-dependent covariate effects. We also apply TG to quantify the predictive ability of multivariable prognostic models developed in several disease areas. CONCLUSIONS: Overall, TG performs well in our simulation studies and can be recommended as a measure to quantify the predictive ability in survival models. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12874-015-0042-x) contains supplementary material, which is available to authorized users.
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spelling pubmed-44866982015-07-02 The extension of total gain (TG) statistic in survival models: properties and applications Choodari-Oskooei, Babak Royston, Patrick Parmar, Mahesh K.B. BMC Med Res Methodol Research Article BACKGROUND: The results of multivariable regression models are usually summarized in the form of parameter estimates for the covariates, goodness-of-fit statistics, and the relevant p-values. These statistics do not inform us about whether covariate information will lead to any substantial improvement in prediction. Predictive ability measures can be used for this purpose since they provide important information about the practical significance of prognostic factors. R(2)-type indices are the most familiar forms of such measures in survival models, but they all have limitations and none is widely used. METHODS: In this paper, we extend the total gain (TG) measure, proposed for a logistic regression model, to survival models and explore its properties using simulations and real data. TG is based on the binary regression quantile plot, otherwise known as the predictiveness curve. Standardised TG ranges from 0 (no explanatory power) to 1 (‘perfect’ explanatory power). RESULTS: The results of our simulations show that unlike many of the other R(2)-type predictive ability measures, TG is independent of random censoring. It increases as the effect of a covariate increases and can be applied to different types of survival models, including models with time-dependent covariate effects. We also apply TG to quantify the predictive ability of multivariable prognostic models developed in several disease areas. CONCLUSIONS: Overall, TG performs well in our simulation studies and can be recommended as a measure to quantify the predictive ability in survival models. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12874-015-0042-x) contains supplementary material, which is available to authorized users. BioMed Central 2015-07-01 /pmc/articles/PMC4486698/ /pubmed/26126418 http://dx.doi.org/10.1186/s12874-015-0042-x Text en © Choodari-Oskooei et al 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Choodari-Oskooei, Babak
Royston, Patrick
Parmar, Mahesh K.B.
The extension of total gain (TG) statistic in survival models: properties and applications
title The extension of total gain (TG) statistic in survival models: properties and applications
title_full The extension of total gain (TG) statistic in survival models: properties and applications
title_fullStr The extension of total gain (TG) statistic in survival models: properties and applications
title_full_unstemmed The extension of total gain (TG) statistic in survival models: properties and applications
title_short The extension of total gain (TG) statistic in survival models: properties and applications
title_sort extension of total gain (tg) statistic in survival models: properties and applications
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4486698/
https://www.ncbi.nlm.nih.gov/pubmed/26126418
http://dx.doi.org/10.1186/s12874-015-0042-x
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