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Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies
Olfactomedin (OLF) domains are found within extracellular, multidomain proteins in numerous tissues of multicellular organisms. Even though these proteins have been implicated in human disorders ranging from cancers to attention deficit disorder to glaucoma, little is known about their structure(s)...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4488277/ https://www.ncbi.nlm.nih.gov/pubmed/26121352 http://dx.doi.org/10.1371/journal.pone.0130888 |
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author | Hill, Shannon E. Donegan, Rebecca K. Nguyen, Elaine Desai, Tanay M. Lieberman, Raquel L. |
author_facet | Hill, Shannon E. Donegan, Rebecca K. Nguyen, Elaine Desai, Tanay M. Lieberman, Raquel L. |
author_sort | Hill, Shannon E. |
collection | PubMed |
description | Olfactomedin (OLF) domains are found within extracellular, multidomain proteins in numerous tissues of multicellular organisms. Even though these proteins have been implicated in human disorders ranging from cancers to attention deficit disorder to glaucoma, little is known about their structure(s) and function(s). Here we biophysically, biochemically, and structurally characterize OLF domains from H. sapiens olfactomedin-1 (npoh-OLF, also called noelin, pancortin, OLFM1, and hOlfA), and M. musculus gliomedin (glio-OLF, also called collomin, collmin, and CRG-L2), and compare them with available structures of myocilin (myoc-OLF) recently reported by us and R. norvegicus glio-OLF and M. musculus latrophilin-3 (lat3-OLF) by others. Although the five-bladed β-propeller architecture remains unchanged, numerous physicochemical characteristics differ among these OLF domains. First, npoh-OLF and glio-OLF exhibit prominent, yet distinct, positive surface charges and copurify with polynucleotides. Second, whereas npoh-OLF and myoc-OLF exhibit thermal stabilities typical of human proteins near 55°C, and most myoc-OLF variants are destabilized and highly prone to aggregation, glio-OLF is nearly 20°C more stable and significantly more resistant to chemical denaturation. Phylogenetically, glio-OLF is most similar to primitive OLFs, and structurally, glio-OLF is missing distinguishing features seen in OLFs such as the disulfide bond formed by N- and C- terminal cysteines, the sequestered Ca(2+) ion within the propeller central hydrophilic cavity, and a key loop-stabilizing cation-π interaction on the top face of npoh-OLF and myoc-OLF. While deciphering the explicit biological functions, ligands, and binding partners for OLF domains will likely continue to be a challenging long-term experimental pursuit, we used structural insights gained here to generate a new antibody selective for myoc-OLF over npoh-OLF and glio-OLF as a first step in overcoming the impasse in detailed functional characterization of these biomedically important protein domains. |
format | Online Article Text |
id | pubmed-4488277 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-44882772015-07-02 Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies Hill, Shannon E. Donegan, Rebecca K. Nguyen, Elaine Desai, Tanay M. Lieberman, Raquel L. PLoS One Research Article Olfactomedin (OLF) domains are found within extracellular, multidomain proteins in numerous tissues of multicellular organisms. Even though these proteins have been implicated in human disorders ranging from cancers to attention deficit disorder to glaucoma, little is known about their structure(s) and function(s). Here we biophysically, biochemically, and structurally characterize OLF domains from H. sapiens olfactomedin-1 (npoh-OLF, also called noelin, pancortin, OLFM1, and hOlfA), and M. musculus gliomedin (glio-OLF, also called collomin, collmin, and CRG-L2), and compare them with available structures of myocilin (myoc-OLF) recently reported by us and R. norvegicus glio-OLF and M. musculus latrophilin-3 (lat3-OLF) by others. Although the five-bladed β-propeller architecture remains unchanged, numerous physicochemical characteristics differ among these OLF domains. First, npoh-OLF and glio-OLF exhibit prominent, yet distinct, positive surface charges and copurify with polynucleotides. Second, whereas npoh-OLF and myoc-OLF exhibit thermal stabilities typical of human proteins near 55°C, and most myoc-OLF variants are destabilized and highly prone to aggregation, glio-OLF is nearly 20°C more stable and significantly more resistant to chemical denaturation. Phylogenetically, glio-OLF is most similar to primitive OLFs, and structurally, glio-OLF is missing distinguishing features seen in OLFs such as the disulfide bond formed by N- and C- terminal cysteines, the sequestered Ca(2+) ion within the propeller central hydrophilic cavity, and a key loop-stabilizing cation-π interaction on the top face of npoh-OLF and myoc-OLF. While deciphering the explicit biological functions, ligands, and binding partners for OLF domains will likely continue to be a challenging long-term experimental pursuit, we used structural insights gained here to generate a new antibody selective for myoc-OLF over npoh-OLF and glio-OLF as a first step in overcoming the impasse in detailed functional characterization of these biomedically important protein domains. Public Library of Science 2015-06-29 /pmc/articles/PMC4488277/ /pubmed/26121352 http://dx.doi.org/10.1371/journal.pone.0130888 Text en © 2015 Hill et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Hill, Shannon E. Donegan, Rebecca K. Nguyen, Elaine Desai, Tanay M. Lieberman, Raquel L. Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies |
title | Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies |
title_full | Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies |
title_fullStr | Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies |
title_full_unstemmed | Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies |
title_short | Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies |
title_sort | molecular details of olfactomedin domains provide pathway to structure-function studies |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4488277/ https://www.ncbi.nlm.nih.gov/pubmed/26121352 http://dx.doi.org/10.1371/journal.pone.0130888 |
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