Cargando…

A Conserved Pattern of Primer-Dependent Transcription Initiation in Escherichia coli and Vibrio cholerae Revealed by 5′ RNA-seq

Transcription initiation that involves the use of a 2- to ~4-nt oligoribonucleotide primer, “primer-dependent initiation,” (PDI) has been shown to be widely prevalent at promoters of genes expressed during the stationary phase of growth in Escherichia coli. However, the extent to which PDI impacts E...

Descripción completa

Detalles Bibliográficos
Autores principales:	Druzhinin, Sergey Y., Tran, Ngat T., Skalenko, Kyle S., Goldman, Seth R., Knoblauch, Jared G., Dove, Simon L., Nickels, Bryce E.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2015
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4488433/ https://www.ncbi.nlm.nih.gov/pubmed/26131907 http://dx.doi.org/10.1371/journal.pgen.1005348

Ejemplares similares

Vibrio parahaemolyticus, enterotoxigenic Escherichia coli, enterohemorrhagic Escherichia coli and Vibrio cholerae
por: TAKEDA, Yoshifumi
Publicado: (2011)

In Silico Analyses of Primers Used to Detect the Pathogenicity Genes of Vibrio cholerae
por: Gardès, Julien, et al.
Publicado: (2012)

An RNA-seq method for defining endoribonuclease cleavage specificity identifies dual rRNA substrates for toxin MazF-mt3
por: Schifano, Jason M., et al.
Publicado: (2014)

Mr.Vc: a database of microarray and RNA-seq of Vibrio cholerae
por: Zhang, Zhiyuan, et al.
Publicado: (2019)

DIFFERENTIAL INHIBITORY EFFECTS OF CHOLERA TOXOIDS AND GANGLIOSIDE ON THE ENTEROTOXINS OF VIBRIO CHOLERAE AND ESCHERICHIA COLI
por: Pierce, Nathaniel F.
Publicado: (1973)

Enterotoxigenic Escherichia coli and Vibrio cholerae Diarrhea, Bangladesh, 2004
por: Qadri, Firdausi, et al.
Publicado: (2005)

Rapid Protocol for Preparation of Electrocompetent Escherichia coli and Vibrio cholerae
por: Gonzales, Miguel F., et al.
Publicado: (2013)

Study of the Cholera Vibrio: The Epidemic and Endemic Types of Cholera Vibrios
por: Stewart, A. D., et al.
Publicado: (1935)

Cholera in Mozambique, Variant of Vibrio cholerae
por: Ansaruzzaman, M., et al.
Publicado: (2004)

Lessons from cholera & Vibrio cholerae
por: Ghose, Asoke C.
Publicado: (2011)

Vibrio cholerae Biofilms and Cholera Pathogenesis
por: Silva, Anisia J., et al.
Publicado: (2016)

Vibrio cholerae autoinducer-1 enhances the virulence of enteropathogenic Escherichia coli
por: Gorelik, Orna, et al.
Publicado: (2019)

XACT-seq: A photocrosslinking-based technique for detection of the RNA polymerase active-center position relative to DNA in Escherichia coli
por: Pukhrambam, Chirangini, et al.
Publicado: (2021)

A Conserved Regulatory Circuit Controls Large Adhesins in Vibrio cholerae
por: Kitts, Giordan, et al.
Publicado: (2019)

The primary σ factor in Escherichia coli can access the transcription elongation complex from solution in vivo
por: Goldman, Seth R, et al.
Publicado: (2015)

THE RECOGNITION OF THE CHOLERA VIBRIO
por: Craster, C. V.
Publicado: (1914)

Combating cholera by building predictive capabilities for pathogenic Vibrio cholerae in Yemen
por: Usmani, Moiz, et al.
Publicado: (2023)

Glucose confers protection to Escherichia coli against contact killing by Vibrio cholerae
por: Crisan, Cristian V., et al.
Publicado: (2021)

Sequestration of a dual function DNA-binding protein by Vibrio cholerae CRP
por: Gibson, Jacob A., et al.
Publicado: (2022)

CapZyme-Seq: A 5′-RNA-Seq Method for Differential Detection and Quantitation of NAD-Capped and Uncapped 5′-Triphosphate RNA
por: Vvedenskaya, Irina O., et al.
Publicado: (2020)

Vibrio Choleræ and Other Vibrios. (Observations on 'Water Vibrios', with Special Reference to Their Variation during Storage in Culture Medium and Possible Relationship to Vibrio Choleræ)
por: Vardon, A. C.
Publicado: (1940)

Vibrio cholerae outbreak in Italy.
por: Cavalieri d'Oro, L, et al.
Publicado: (1999)

Vibrio cholerae Pathogenic Clones
por: Salim, Anna, et al.
Publicado: (2005)

Resistance to ceftriaxone in Vibrio cholerae
por: Mandal, Jharna, et al.
Publicado: (2012)

Metchnikoff's Researches on the Cholera Vibrio
Publicado: (1894)

Prevalent Types of Cholera Vibrio
por: Gupta, S. K. Sen
Publicado: (1943)

Fish as Hosts of Vibrio cholerae
por: Halpern, Malka, et al.
Publicado: (2017)

The chemosensory systems of Vibrio cholerae
por: Ortega, Davi R., et al.
Publicado: (2020)

Structural inferences for Cholera toxin mutations in Vibrio cholerae
por: Shamini, Gunasagaran, et al.
Publicado: (2011)

The Isolation of Vibrio choleræ from Non-Cholera Individuals
por: Pasricha, C. L., et al.
Publicado: (1938)

Changing facades of Vibrio cholerae: An enigma in the epidemiology of cholera
por: Lekshmi, N., et al.
Publicado: (2018)

Antibacterial activity of silver and zinc nanoparticles against Vibrio cholerae and enterotoxic Escherichia coli
por: Salem, Wesam, et al.
Publicado: (2015)

Structural and mechanistic basis of σ-dependent transcriptional pausing
por: Pukhrambam, Chirangini, et al.
Publicado: (2022)

Mutation of Cholera Vibrios: The Characters of the Population of a Freshly-Isolated Cholera Colony, with a Note on Some Colony Variants of Cholera and Cholera-Like Vibrios
por: Pasricha, C. L., et al.
Publicado: (1932)

Can the Non-Agglutinating Vibrios Be Mutation Forms of the Cholera Vibrio?
por: Brahmachari, B. B.
Publicado: (1927)

Revisiting the Global Epidemiology of Cholera in Conjunction With the Genomics of Vibrio cholerae
por: Ramamurthy, Thandavarayan, et al.
Publicado: (2019)

DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae
por: Heidelberg, John F., et al.
Publicado: (2000)

Establishing a System for Testing Replication Inhibition of the Vibrio cholerae Secondary Chromosome in Escherichia coli
por: Schallopp, Nadine, et al.
Publicado: (2017)

Mutation of Cholera-Like Vibrios under the Action of Bacteriophage: Lysability of Cholera-Like Vibrios by Pure-Line Races of Cholera Bacteriophage and Changes Induced in the Serological Reactions of Cholera-Like Vibrios under the Influence of Bacteriophage
por: Pasricha, C. L., et al.
Publicado: (1931)

A highly specific phage defense system is a conserved feature of the Vibrio cholerae mobilome
por: O’Hara, Brendan J., et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_h9o8aupe6aiivd765bj504a3de