Cargando…

A Mutagenesis Assay for Reporter Gene Screening Using Partially Degenerate Oligonucleotides of the Tandems NNT and NNC

Not all proteins are tolerable to mutations. Whether a specific protein can be a mutable target is of importance in the biotechnology and pharmaceutical industry. This study reported a novel mutagenesis assay using tandem NNT and NNC oligonucleotides to test the mutability of a candidate gene. These...

Descripción completa

Detalles Bibliográficos
Autores principales: Xu, Huifen, Zhou, Cuilan, Zhang, Andy K., Li, Wen, Zhang, Jia, Li, Kai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4488517/
https://www.ncbi.nlm.nih.gov/pubmed/26167508
http://dx.doi.org/10.1155/2015/950873
_version_ 1782379173606588416
author Xu, Huifen
Zhou, Cuilan
Zhang, Andy K.
Li, Wen
Zhang, Jia
Li, Kai
author_facet Xu, Huifen
Zhou, Cuilan
Zhang, Andy K.
Li, Wen
Zhang, Jia
Li, Kai
author_sort Xu, Huifen
collection PubMed
description Not all proteins are tolerable to mutations. Whether a specific protein can be a mutable target is of importance in the biotechnology and pharmaceutical industry. This study reported a novel mutagenesis assay using tandem NNT and NNC oligonucleotides to test the mutability of a candidate gene. These two tandem oligonucleotides avoid the risk of forming nonsense mutations and render flexibility of truncating or expanding the insertion size. As a reporter gene, ZeoR (zeocin resistance gene) was confirmed to have a high tolerance for mutagenesis by this new assay.
format Online
Article
Text
id pubmed-4488517
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Hindawi Publishing Corporation
record_format MEDLINE/PubMed
spelling pubmed-44885172015-07-12 A Mutagenesis Assay for Reporter Gene Screening Using Partially Degenerate Oligonucleotides of the Tandems NNT and NNC Xu, Huifen Zhou, Cuilan Zhang, Andy K. Li, Wen Zhang, Jia Li, Kai Biomed Res Int Research Article Not all proteins are tolerable to mutations. Whether a specific protein can be a mutable target is of importance in the biotechnology and pharmaceutical industry. This study reported a novel mutagenesis assay using tandem NNT and NNC oligonucleotides to test the mutability of a candidate gene. These two tandem oligonucleotides avoid the risk of forming nonsense mutations and render flexibility of truncating or expanding the insertion size. As a reporter gene, ZeoR (zeocin resistance gene) was confirmed to have a high tolerance for mutagenesis by this new assay. Hindawi Publishing Corporation 2015 2015-06-18 /pmc/articles/PMC4488517/ /pubmed/26167508 http://dx.doi.org/10.1155/2015/950873 Text en Copyright © 2015 Huifen Xu et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Xu, Huifen
Zhou, Cuilan
Zhang, Andy K.
Li, Wen
Zhang, Jia
Li, Kai
A Mutagenesis Assay for Reporter Gene Screening Using Partially Degenerate Oligonucleotides of the Tandems NNT and NNC
title A Mutagenesis Assay for Reporter Gene Screening Using Partially Degenerate Oligonucleotides of the Tandems NNT and NNC
title_full A Mutagenesis Assay for Reporter Gene Screening Using Partially Degenerate Oligonucleotides of the Tandems NNT and NNC
title_fullStr A Mutagenesis Assay for Reporter Gene Screening Using Partially Degenerate Oligonucleotides of the Tandems NNT and NNC
title_full_unstemmed A Mutagenesis Assay for Reporter Gene Screening Using Partially Degenerate Oligonucleotides of the Tandems NNT and NNC
title_short A Mutagenesis Assay for Reporter Gene Screening Using Partially Degenerate Oligonucleotides of the Tandems NNT and NNC
title_sort mutagenesis assay for reporter gene screening using partially degenerate oligonucleotides of the tandems nnt and nnc
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4488517/
https://www.ncbi.nlm.nih.gov/pubmed/26167508
http://dx.doi.org/10.1155/2015/950873
work_keys_str_mv AT xuhuifen amutagenesisassayforreportergenescreeningusingpartiallydegenerateoligonucleotidesofthetandemsnntandnnc
AT zhoucuilan amutagenesisassayforreportergenescreeningusingpartiallydegenerateoligonucleotidesofthetandemsnntandnnc
AT zhangandyk amutagenesisassayforreportergenescreeningusingpartiallydegenerateoligonucleotidesofthetandemsnntandnnc
AT liwen amutagenesisassayforreportergenescreeningusingpartiallydegenerateoligonucleotidesofthetandemsnntandnnc
AT zhangjia amutagenesisassayforreportergenescreeningusingpartiallydegenerateoligonucleotidesofthetandemsnntandnnc
AT likai amutagenesisassayforreportergenescreeningusingpartiallydegenerateoligonucleotidesofthetandemsnntandnnc
AT xuhuifen mutagenesisassayforreportergenescreeningusingpartiallydegenerateoligonucleotidesofthetandemsnntandnnc
AT zhoucuilan mutagenesisassayforreportergenescreeningusingpartiallydegenerateoligonucleotidesofthetandemsnntandnnc
AT zhangandyk mutagenesisassayforreportergenescreeningusingpartiallydegenerateoligonucleotidesofthetandemsnntandnnc
AT liwen mutagenesisassayforreportergenescreeningusingpartiallydegenerateoligonucleotidesofthetandemsnntandnnc
AT zhangjia mutagenesisassayforreportergenescreeningusingpartiallydegenerateoligonucleotidesofthetandemsnntandnnc
AT likai mutagenesisassayforreportergenescreeningusingpartiallydegenerateoligonucleotidesofthetandemsnntandnnc