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iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians
The planarian Dugesia japonica has amazing ability to regenerate a head from the anterior ends of the amputated stump with maintenance of the original anterior-posterior polarity. Although planarians present an attractive system for molecular investigation of regeneration and research has focused on...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4488856/ https://www.ncbi.nlm.nih.gov/pubmed/26131905 http://dx.doi.org/10.1371/journal.pone.0132045 |
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author | Geng, Xiaofang Wang, Gaiping Qin, Yanli Zang, Xiayan Li, Pengfei Geng, Zhi Xue, Deming Dong, Zimei Ma, Kexue Chen, Guangwen Xu, Cunshuan |
author_facet | Geng, Xiaofang Wang, Gaiping Qin, Yanli Zang, Xiayan Li, Pengfei Geng, Zhi Xue, Deming Dong, Zimei Ma, Kexue Chen, Guangwen Xu, Cunshuan |
author_sort | Geng, Xiaofang |
collection | PubMed |
description | The planarian Dugesia japonica has amazing ability to regenerate a head from the anterior ends of the amputated stump with maintenance of the original anterior-posterior polarity. Although planarians present an attractive system for molecular investigation of regeneration and research has focused on clarifying the molecular mechanism of regeneration initiation in planarians at transcriptional level, but the initiation mechanism of planarian head regeneration (PHR) remains unclear at the protein level. Here, a global analysis of proteome dynamics during the early stage of PHR was performed using isobaric tags for relative and absolute quantitation (iTRAQ)-based quantitative proteomics strategy, and our data are available via ProteomeXchange with identifier PXD002100. The results showed that 162 proteins were differentially expressed at 2 h and 6 h following amputation. Furthermore, the analysis of expression patterns and functional enrichment of the differentially expressed proteins showed that proteins involved in muscle contraction, oxidation reduction and protein synthesis were up-regulated in the initiation of PHR. Moreover, ingenuity pathway analysis showed that predominant signaling pathways such as ILK, calcium, EIF2 and mTOR signaling which were associated with cell migration, cell proliferation and protein synthesis were likely to be involved in the initiation of PHR. The results for the first time demonstrated that muscle contraction and ILK signaling might played important roles in the initiation of PHR at the global protein level. The findings of this research provide a molecular basis for further unraveling the mechanism of head regeneration initiation in planarians. |
format | Online Article Text |
id | pubmed-4488856 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-44888562015-07-14 iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians Geng, Xiaofang Wang, Gaiping Qin, Yanli Zang, Xiayan Li, Pengfei Geng, Zhi Xue, Deming Dong, Zimei Ma, Kexue Chen, Guangwen Xu, Cunshuan PLoS One Research Article The planarian Dugesia japonica has amazing ability to regenerate a head from the anterior ends of the amputated stump with maintenance of the original anterior-posterior polarity. Although planarians present an attractive system for molecular investigation of regeneration and research has focused on clarifying the molecular mechanism of regeneration initiation in planarians at transcriptional level, but the initiation mechanism of planarian head regeneration (PHR) remains unclear at the protein level. Here, a global analysis of proteome dynamics during the early stage of PHR was performed using isobaric tags for relative and absolute quantitation (iTRAQ)-based quantitative proteomics strategy, and our data are available via ProteomeXchange with identifier PXD002100. The results showed that 162 proteins were differentially expressed at 2 h and 6 h following amputation. Furthermore, the analysis of expression patterns and functional enrichment of the differentially expressed proteins showed that proteins involved in muscle contraction, oxidation reduction and protein synthesis were up-regulated in the initiation of PHR. Moreover, ingenuity pathway analysis showed that predominant signaling pathways such as ILK, calcium, EIF2 and mTOR signaling which were associated with cell migration, cell proliferation and protein synthesis were likely to be involved in the initiation of PHR. The results for the first time demonstrated that muscle contraction and ILK signaling might played important roles in the initiation of PHR at the global protein level. The findings of this research provide a molecular basis for further unraveling the mechanism of head regeneration initiation in planarians. Public Library of Science 2015-07-01 /pmc/articles/PMC4488856/ /pubmed/26131905 http://dx.doi.org/10.1371/journal.pone.0132045 Text en © 2015 Geng et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Geng, Xiaofang Wang, Gaiping Qin, Yanli Zang, Xiayan Li, Pengfei Geng, Zhi Xue, Deming Dong, Zimei Ma, Kexue Chen, Guangwen Xu, Cunshuan iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians |
title | iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians |
title_full | iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians |
title_fullStr | iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians |
title_full_unstemmed | iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians |
title_short | iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians |
title_sort | itraq-based quantitative proteomic analysis of the initiation of head regeneration in planarians |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4488856/ https://www.ncbi.nlm.nih.gov/pubmed/26131905 http://dx.doi.org/10.1371/journal.pone.0132045 |
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