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iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians

The planarian Dugesia japonica has amazing ability to regenerate a head from the anterior ends of the amputated stump with maintenance of the original anterior-posterior polarity. Although planarians present an attractive system for molecular investigation of regeneration and research has focused on...

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Autores principales: Geng, Xiaofang, Wang, Gaiping, Qin, Yanli, Zang, Xiayan, Li, Pengfei, Geng, Zhi, Xue, Deming, Dong, Zimei, Ma, Kexue, Chen, Guangwen, Xu, Cunshuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4488856/
https://www.ncbi.nlm.nih.gov/pubmed/26131905
http://dx.doi.org/10.1371/journal.pone.0132045
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author Geng, Xiaofang
Wang, Gaiping
Qin, Yanli
Zang, Xiayan
Li, Pengfei
Geng, Zhi
Xue, Deming
Dong, Zimei
Ma, Kexue
Chen, Guangwen
Xu, Cunshuan
author_facet Geng, Xiaofang
Wang, Gaiping
Qin, Yanli
Zang, Xiayan
Li, Pengfei
Geng, Zhi
Xue, Deming
Dong, Zimei
Ma, Kexue
Chen, Guangwen
Xu, Cunshuan
author_sort Geng, Xiaofang
collection PubMed
description The planarian Dugesia japonica has amazing ability to regenerate a head from the anterior ends of the amputated stump with maintenance of the original anterior-posterior polarity. Although planarians present an attractive system for molecular investigation of regeneration and research has focused on clarifying the molecular mechanism of regeneration initiation in planarians at transcriptional level, but the initiation mechanism of planarian head regeneration (PHR) remains unclear at the protein level. Here, a global analysis of proteome dynamics during the early stage of PHR was performed using isobaric tags for relative and absolute quantitation (iTRAQ)-based quantitative proteomics strategy, and our data are available via ProteomeXchange with identifier PXD002100. The results showed that 162 proteins were differentially expressed at 2 h and 6 h following amputation. Furthermore, the analysis of expression patterns and functional enrichment of the differentially expressed proteins showed that proteins involved in muscle contraction, oxidation reduction and protein synthesis were up-regulated in the initiation of PHR. Moreover, ingenuity pathway analysis showed that predominant signaling pathways such as ILK, calcium, EIF2 and mTOR signaling which were associated with cell migration, cell proliferation and protein synthesis were likely to be involved in the initiation of PHR. The results for the first time demonstrated that muscle contraction and ILK signaling might played important roles in the initiation of PHR at the global protein level. The findings of this research provide a molecular basis for further unraveling the mechanism of head regeneration initiation in planarians.
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spelling pubmed-44888562015-07-14 iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians Geng, Xiaofang Wang, Gaiping Qin, Yanli Zang, Xiayan Li, Pengfei Geng, Zhi Xue, Deming Dong, Zimei Ma, Kexue Chen, Guangwen Xu, Cunshuan PLoS One Research Article The planarian Dugesia japonica has amazing ability to regenerate a head from the anterior ends of the amputated stump with maintenance of the original anterior-posterior polarity. Although planarians present an attractive system for molecular investigation of regeneration and research has focused on clarifying the molecular mechanism of regeneration initiation in planarians at transcriptional level, but the initiation mechanism of planarian head regeneration (PHR) remains unclear at the protein level. Here, a global analysis of proteome dynamics during the early stage of PHR was performed using isobaric tags for relative and absolute quantitation (iTRAQ)-based quantitative proteomics strategy, and our data are available via ProteomeXchange with identifier PXD002100. The results showed that 162 proteins were differentially expressed at 2 h and 6 h following amputation. Furthermore, the analysis of expression patterns and functional enrichment of the differentially expressed proteins showed that proteins involved in muscle contraction, oxidation reduction and protein synthesis were up-regulated in the initiation of PHR. Moreover, ingenuity pathway analysis showed that predominant signaling pathways such as ILK, calcium, EIF2 and mTOR signaling which were associated with cell migration, cell proliferation and protein synthesis were likely to be involved in the initiation of PHR. The results for the first time demonstrated that muscle contraction and ILK signaling might played important roles in the initiation of PHR at the global protein level. The findings of this research provide a molecular basis for further unraveling the mechanism of head regeneration initiation in planarians. Public Library of Science 2015-07-01 /pmc/articles/PMC4488856/ /pubmed/26131905 http://dx.doi.org/10.1371/journal.pone.0132045 Text en © 2015 Geng et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Geng, Xiaofang
Wang, Gaiping
Qin, Yanli
Zang, Xiayan
Li, Pengfei
Geng, Zhi
Xue, Deming
Dong, Zimei
Ma, Kexue
Chen, Guangwen
Xu, Cunshuan
iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians
title iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians
title_full iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians
title_fullStr iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians
title_full_unstemmed iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians
title_short iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians
title_sort itraq-based quantitative proteomic analysis of the initiation of head regeneration in planarians
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4488856/
https://www.ncbi.nlm.nih.gov/pubmed/26131905
http://dx.doi.org/10.1371/journal.pone.0132045
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