The ReproGenomics Viewer: an integrative cross-species toolbox for the reproductive science community

We report the development of the ReproGenomics Viewer (RGV), a multi- and cross-species working environment for the visualization, mining and comparison of published omics data sets for the reproductive science community. The system currently embeds 15 published data sets related to gametogenesis fr...

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Detalles Bibliográficos
Autores principales: Darde, Thomas A., Sallou, Olivier, Becker, Emmanuelle, Evrard, Bertrand, Monjeaud, Cyril, Le Bras, Yvan, Jégou, Bernard, Collin, Olivier, Rolland, Antoine D., Chalmel, Frédéric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Web Server issue
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4489245/
https://www.ncbi.nlm.nih.gov/pubmed/25883147
http://dx.doi.org/10.1093/nar/gkv345
Descripción
Sumario:We report the development of the ReproGenomics Viewer (RGV), a multi- and cross-species working environment for the visualization, mining and comparison of published omics data sets for the reproductive science community. The system currently embeds 15 published data sets related to gametogenesis from nine model organisms. Data sets have been curated and conveniently organized into broad categories including biological topics, technologies, species and publications. RGV's modular design for both organisms and genomic tools enables users to upload and compare their data with that from the data sets embedded in the system in a cross-species manner. The RGV is freely available at http://rgv.genouest.org.

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