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TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks

TFmiR is a freely available web server for deep and integrative analysis of combinatorial regulatory interactions between transcription factors, microRNAs and target genes that are involved in disease pathogenesis. Since the inner workings of cells rely on the correct functioning of an enormously co...

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Detalles Bibliográficos
Autores principales: Hamed, Mohamed, Spaniol, Christian, Nazarieh, Maryam, Helms, Volkhard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4489273/
https://www.ncbi.nlm.nih.gov/pubmed/25943543
http://dx.doi.org/10.1093/nar/gkv418
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author Hamed, Mohamed
Spaniol, Christian
Nazarieh, Maryam
Helms, Volkhard
author_facet Hamed, Mohamed
Spaniol, Christian
Nazarieh, Maryam
Helms, Volkhard
author_sort Hamed, Mohamed
collection PubMed
description TFmiR is a freely available web server for deep and integrative analysis of combinatorial regulatory interactions between transcription factors, microRNAs and target genes that are involved in disease pathogenesis. Since the inner workings of cells rely on the correct functioning of an enormously complex system of activating and repressing interactions that can be perturbed in many ways, TFmiR helps to better elucidate cellular mechanisms at the molecular level from a network perspective. The provided topological and functional analyses promote TFmiR as a reliable systems biology tool for researchers across the life science communities. TFmiR web server is accessible through the following URL: http://service.bioinformatik.uni-saarland.de/tfmir.
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spelling pubmed-44892732015-07-07 TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks Hamed, Mohamed Spaniol, Christian Nazarieh, Maryam Helms, Volkhard Nucleic Acids Res Web Server issue TFmiR is a freely available web server for deep and integrative analysis of combinatorial regulatory interactions between transcription factors, microRNAs and target genes that are involved in disease pathogenesis. Since the inner workings of cells rely on the correct functioning of an enormously complex system of activating and repressing interactions that can be perturbed in many ways, TFmiR helps to better elucidate cellular mechanisms at the molecular level from a network perspective. The provided topological and functional analyses promote TFmiR as a reliable systems biology tool for researchers across the life science communities. TFmiR web server is accessible through the following URL: http://service.bioinformatik.uni-saarland.de/tfmir. Oxford University Press 2015-07-01 2015-05-05 /pmc/articles/PMC4489273/ /pubmed/25943543 http://dx.doi.org/10.1093/nar/gkv418 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Web Server issue
Hamed, Mohamed
Spaniol, Christian
Nazarieh, Maryam
Helms, Volkhard
TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks
title TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks
title_full TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks
title_fullStr TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks
title_full_unstemmed TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks
title_short TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks
title_sort tfmir: a web server for constructing and analyzing disease-specific transcription factor and mirna co-regulatory networks
topic Web Server issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4489273/
https://www.ncbi.nlm.nih.gov/pubmed/25943543
http://dx.doi.org/10.1093/nar/gkv418
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