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TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks
TFmiR is a freely available web server for deep and integrative analysis of combinatorial regulatory interactions between transcription factors, microRNAs and target genes that are involved in disease pathogenesis. Since the inner workings of cells rely on the correct functioning of an enormously co...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4489273/ https://www.ncbi.nlm.nih.gov/pubmed/25943543 http://dx.doi.org/10.1093/nar/gkv418 |
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author | Hamed, Mohamed Spaniol, Christian Nazarieh, Maryam Helms, Volkhard |
author_facet | Hamed, Mohamed Spaniol, Christian Nazarieh, Maryam Helms, Volkhard |
author_sort | Hamed, Mohamed |
collection | PubMed |
description | TFmiR is a freely available web server for deep and integrative analysis of combinatorial regulatory interactions between transcription factors, microRNAs and target genes that are involved in disease pathogenesis. Since the inner workings of cells rely on the correct functioning of an enormously complex system of activating and repressing interactions that can be perturbed in many ways, TFmiR helps to better elucidate cellular mechanisms at the molecular level from a network perspective. The provided topological and functional analyses promote TFmiR as a reliable systems biology tool for researchers across the life science communities. TFmiR web server is accessible through the following URL: http://service.bioinformatik.uni-saarland.de/tfmir. |
format | Online Article Text |
id | pubmed-4489273 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-44892732015-07-07 TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks Hamed, Mohamed Spaniol, Christian Nazarieh, Maryam Helms, Volkhard Nucleic Acids Res Web Server issue TFmiR is a freely available web server for deep and integrative analysis of combinatorial regulatory interactions between transcription factors, microRNAs and target genes that are involved in disease pathogenesis. Since the inner workings of cells rely on the correct functioning of an enormously complex system of activating and repressing interactions that can be perturbed in many ways, TFmiR helps to better elucidate cellular mechanisms at the molecular level from a network perspective. The provided topological and functional analyses promote TFmiR as a reliable systems biology tool for researchers across the life science communities. TFmiR web server is accessible through the following URL: http://service.bioinformatik.uni-saarland.de/tfmir. Oxford University Press 2015-07-01 2015-05-05 /pmc/articles/PMC4489273/ /pubmed/25943543 http://dx.doi.org/10.1093/nar/gkv418 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Web Server issue Hamed, Mohamed Spaniol, Christian Nazarieh, Maryam Helms, Volkhard TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks |
title | TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks |
title_full | TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks |
title_fullStr | TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks |
title_full_unstemmed | TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks |
title_short | TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks |
title_sort | tfmir: a web server for constructing and analyzing disease-specific transcription factor and mirna co-regulatory networks |
topic | Web Server issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4489273/ https://www.ncbi.nlm.nih.gov/pubmed/25943543 http://dx.doi.org/10.1093/nar/gkv418 |
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