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Actinospica durhamensis sp. nov., isolated from a spruce forest soil

Seven acidophilic actinobacteria isolated from humus and mineral layers of a spruce forest soil were examined using a polyphasic approach. Chemotaxonomic properties of the isolates were found to be consistent with their classification in the genus Actinospica. The strains formed a distinct phyletic...

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Autores principales: Golinska, Patrycja, Zucchi, Tiago Domingues, Silva, Leonardo, Dahm, Hanna, Goodfellow, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4491342/
https://www.ncbi.nlm.nih.gov/pubmed/26026797
http://dx.doi.org/10.1007/s10482-015-0496-1
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author Golinska, Patrycja
Zucchi, Tiago Domingues
Silva, Leonardo
Dahm, Hanna
Goodfellow, Michael
author_facet Golinska, Patrycja
Zucchi, Tiago Domingues
Silva, Leonardo
Dahm, Hanna
Goodfellow, Michael
author_sort Golinska, Patrycja
collection PubMed
description Seven acidophilic actinobacteria isolated from humus and mineral layers of a spruce forest soil were examined using a polyphasic approach. Chemotaxonomic properties of the isolates were found to be consistent with their classification in the genus Actinospica. The strains formed a distinct phyletic line in the Actinospica 16S rRNA gene tree being most closely related to Actinospica robiniae DSM 44927(T) (98.7–99.3 % similarity). DNA:DNA relatedness between isolate CSCA57(T) and the type strain of A. robiniae was found to be low at 40.8 (±6.6) %. The isolates were shown to have many phenotypic properties in common and were distinguished readily from the type strains of Actinospica acidiphila and A. robiniae using a range of phenotypic features. On the basis of these data the seven isolates were considered to represent a new species for which the name Actinospica durhamensis sp. nov. is proposed. The type strain of the species is CSCA 57(T) (=DSM 46820(T) = NCIMB 14953(T)). ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10482-015-0496-1) contains supplementary material, which is available to authorized users.
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spelling pubmed-44913422015-07-08 Actinospica durhamensis sp. nov., isolated from a spruce forest soil Golinska, Patrycja Zucchi, Tiago Domingues Silva, Leonardo Dahm, Hanna Goodfellow, Michael Antonie Van Leeuwenhoek Original Paper Seven acidophilic actinobacteria isolated from humus and mineral layers of a spruce forest soil were examined using a polyphasic approach. Chemotaxonomic properties of the isolates were found to be consistent with their classification in the genus Actinospica. The strains formed a distinct phyletic line in the Actinospica 16S rRNA gene tree being most closely related to Actinospica robiniae DSM 44927(T) (98.7–99.3 % similarity). DNA:DNA relatedness between isolate CSCA57(T) and the type strain of A. robiniae was found to be low at 40.8 (±6.6) %. The isolates were shown to have many phenotypic properties in common and were distinguished readily from the type strains of Actinospica acidiphila and A. robiniae using a range of phenotypic features. On the basis of these data the seven isolates were considered to represent a new species for which the name Actinospica durhamensis sp. nov. is proposed. The type strain of the species is CSCA 57(T) (=DSM 46820(T) = NCIMB 14953(T)). ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10482-015-0496-1) contains supplementary material, which is available to authorized users. Springer International Publishing 2015-05-31 2015 /pmc/articles/PMC4491342/ /pubmed/26026797 http://dx.doi.org/10.1007/s10482-015-0496-1 Text en © The Author(s) 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Original Paper
Golinska, Patrycja
Zucchi, Tiago Domingues
Silva, Leonardo
Dahm, Hanna
Goodfellow, Michael
Actinospica durhamensis sp. nov., isolated from a spruce forest soil
title Actinospica durhamensis sp. nov., isolated from a spruce forest soil
title_full Actinospica durhamensis sp. nov., isolated from a spruce forest soil
title_fullStr Actinospica durhamensis sp. nov., isolated from a spruce forest soil
title_full_unstemmed Actinospica durhamensis sp. nov., isolated from a spruce forest soil
title_short Actinospica durhamensis sp. nov., isolated from a spruce forest soil
title_sort actinospica durhamensis sp. nov., isolated from a spruce forest soil
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4491342/
https://www.ncbi.nlm.nih.gov/pubmed/26026797
http://dx.doi.org/10.1007/s10482-015-0496-1
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