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Phenotype-Driven Plasma Biobanking Strategies and Methods

Biobank development and integration with clinical data from electronic medical record (EMR) databases have enabled recent strides in genomic research and personalized medicine. BioVU, Vanderbilt’s DNA biorepository linked to de-identified clinical EMRs, has proven fruitful in its capacity to extensi...

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Autores principales: Bowton, Erica A., Collier, Sarah P., Wang, Xiaoming, Sutcliffe, Cara B., Van Driest, Sara L., Couch, Lindsay J., Herrera, Miguel, Jerome, Rebecca N., Slebos, Robbert J. C., Alborn, William E., Liebler, Daniel C., McNaughton, Candace D., Mernaugh, Ray L., Wells, Quinn S., Brown, Nancy J., Roden, Dan M., Pulley, Jill M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4493492/
https://www.ncbi.nlm.nih.gov/pubmed/26110578
http://dx.doi.org/10.3390/jpm5020140
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author Bowton, Erica A.
Collier, Sarah P.
Wang, Xiaoming
Sutcliffe, Cara B.
Van Driest, Sara L.
Couch, Lindsay J.
Herrera, Miguel
Jerome, Rebecca N.
Slebos, Robbert J. C.
Alborn, William E.
Liebler, Daniel C.
McNaughton, Candace D.
Mernaugh, Ray L.
Wells, Quinn S.
Brown, Nancy J.
Roden, Dan M.
Pulley, Jill M.
author_facet Bowton, Erica A.
Collier, Sarah P.
Wang, Xiaoming
Sutcliffe, Cara B.
Van Driest, Sara L.
Couch, Lindsay J.
Herrera, Miguel
Jerome, Rebecca N.
Slebos, Robbert J. C.
Alborn, William E.
Liebler, Daniel C.
McNaughton, Candace D.
Mernaugh, Ray L.
Wells, Quinn S.
Brown, Nancy J.
Roden, Dan M.
Pulley, Jill M.
author_sort Bowton, Erica A.
collection PubMed
description Biobank development and integration with clinical data from electronic medical record (EMR) databases have enabled recent strides in genomic research and personalized medicine. BioVU, Vanderbilt’s DNA biorepository linked to de-identified clinical EMRs, has proven fruitful in its capacity to extensively appeal to numerous areas of biomedical and clinical research, supporting the discovery of genotype-phenotype interactions. Expanding on experiences in BioVU creation and development, we have recently embarked on a parallel effort to collect plasma in addition to DNA from blood specimens leftover after routine clinical testing at Vanderbilt. This initiative offers expanded utility of BioVU by combining proteomic and metabolomic approaches with genomics and/or clinical outcomes, widening the breadth for potential research and subsequent future impact on clinical care. Here, we describe the considerations and components involved in implementing a plasma biobank program from a feasibility assessment through pilot sample collection.
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spelling pubmed-44934922015-07-07 Phenotype-Driven Plasma Biobanking Strategies and Methods Bowton, Erica A. Collier, Sarah P. Wang, Xiaoming Sutcliffe, Cara B. Van Driest, Sara L. Couch, Lindsay J. Herrera, Miguel Jerome, Rebecca N. Slebos, Robbert J. C. Alborn, William E. Liebler, Daniel C. McNaughton, Candace D. Mernaugh, Ray L. Wells, Quinn S. Brown, Nancy J. Roden, Dan M. Pulley, Jill M. J Pers Med Article Biobank development and integration with clinical data from electronic medical record (EMR) databases have enabled recent strides in genomic research and personalized medicine. BioVU, Vanderbilt’s DNA biorepository linked to de-identified clinical EMRs, has proven fruitful in its capacity to extensively appeal to numerous areas of biomedical and clinical research, supporting the discovery of genotype-phenotype interactions. Expanding on experiences in BioVU creation and development, we have recently embarked on a parallel effort to collect plasma in addition to DNA from blood specimens leftover after routine clinical testing at Vanderbilt. This initiative offers expanded utility of BioVU by combining proteomic and metabolomic approaches with genomics and/or clinical outcomes, widening the breadth for potential research and subsequent future impact on clinical care. Here, we describe the considerations and components involved in implementing a plasma biobank program from a feasibility assessment through pilot sample collection. MDPI 2015-05-14 /pmc/articles/PMC4493492/ /pubmed/26110578 http://dx.doi.org/10.3390/jpm5020140 Text en © 2015 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Bowton, Erica A.
Collier, Sarah P.
Wang, Xiaoming
Sutcliffe, Cara B.
Van Driest, Sara L.
Couch, Lindsay J.
Herrera, Miguel
Jerome, Rebecca N.
Slebos, Robbert J. C.
Alborn, William E.
Liebler, Daniel C.
McNaughton, Candace D.
Mernaugh, Ray L.
Wells, Quinn S.
Brown, Nancy J.
Roden, Dan M.
Pulley, Jill M.
Phenotype-Driven Plasma Biobanking Strategies and Methods
title Phenotype-Driven Plasma Biobanking Strategies and Methods
title_full Phenotype-Driven Plasma Biobanking Strategies and Methods
title_fullStr Phenotype-Driven Plasma Biobanking Strategies and Methods
title_full_unstemmed Phenotype-Driven Plasma Biobanking Strategies and Methods
title_short Phenotype-Driven Plasma Biobanking Strategies and Methods
title_sort phenotype-driven plasma biobanking strategies and methods
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4493492/
https://www.ncbi.nlm.nih.gov/pubmed/26110578
http://dx.doi.org/10.3390/jpm5020140
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