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Distinct soil bacterial communities along a small-scale elevational gradient in alpine tundra

The elevational diversity pattern for microorganisms has received great attention recently but is still understudied, and phylogenetic relatedness is rarely studied for microbial elevational distributions. Using a bar-coded pyrosequencing technique, we examined the biodiversity patterns for soil bac...

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Autores principales: Shen, Congcong, Ni, Yingying, Liang, Wenju, Wang, Jianjun, Chu, Haiyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4493907/
https://www.ncbi.nlm.nih.gov/pubmed/26217308
http://dx.doi.org/10.3389/fmicb.2015.00582
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author Shen, Congcong
Ni, Yingying
Liang, Wenju
Wang, Jianjun
Chu, Haiyan
author_facet Shen, Congcong
Ni, Yingying
Liang, Wenju
Wang, Jianjun
Chu, Haiyan
author_sort Shen, Congcong
collection PubMed
description The elevational diversity pattern for microorganisms has received great attention recently but is still understudied, and phylogenetic relatedness is rarely studied for microbial elevational distributions. Using a bar-coded pyrosequencing technique, we examined the biodiversity patterns for soil bacterial communities of tundra ecosystem along 2000–2500 m elevations on Changbai Mountain in China. Bacterial taxonomic richness displayed a linear decreasing trend with increasing elevation. Phylogenetic diversity and mean nearest taxon distance (MNTD) exhibited a unimodal pattern with elevation. Bacterial communities were more phylogenetically clustered than expected by chance at all elevations based on the standardized effect size of MNTD metric. The bacterial communities differed dramatically among elevations, and the community composition was significantly correlated with soil total carbon (TC), total nitrogen, C:N ratio, and dissolved organic carbon. Multiple ordinary least squares regression analysis showed that the observed biodiversity patterns strongly correlated with soil TC and C:N ratio. Taken together, this is the first time that a significant bacterial diversity pattern has been observed across a small-scale elevational gradient. Our results indicated that soil carbon and nitrogen contents were the critical environmental factors affecting bacterial elevational distribution in Changbai Mountain tundra. This suggested that ecological niche-based environmental filtering processes related to soil carbon and nitrogen contents could play a dominant role in structuring bacterial communities along the elevational gradient.
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spelling pubmed-44939072015-07-27 Distinct soil bacterial communities along a small-scale elevational gradient in alpine tundra Shen, Congcong Ni, Yingying Liang, Wenju Wang, Jianjun Chu, Haiyan Front Microbiol Microbiology The elevational diversity pattern for microorganisms has received great attention recently but is still understudied, and phylogenetic relatedness is rarely studied for microbial elevational distributions. Using a bar-coded pyrosequencing technique, we examined the biodiversity patterns for soil bacterial communities of tundra ecosystem along 2000–2500 m elevations on Changbai Mountain in China. Bacterial taxonomic richness displayed a linear decreasing trend with increasing elevation. Phylogenetic diversity and mean nearest taxon distance (MNTD) exhibited a unimodal pattern with elevation. Bacterial communities were more phylogenetically clustered than expected by chance at all elevations based on the standardized effect size of MNTD metric. The bacterial communities differed dramatically among elevations, and the community composition was significantly correlated with soil total carbon (TC), total nitrogen, C:N ratio, and dissolved organic carbon. Multiple ordinary least squares regression analysis showed that the observed biodiversity patterns strongly correlated with soil TC and C:N ratio. Taken together, this is the first time that a significant bacterial diversity pattern has been observed across a small-scale elevational gradient. Our results indicated that soil carbon and nitrogen contents were the critical environmental factors affecting bacterial elevational distribution in Changbai Mountain tundra. This suggested that ecological niche-based environmental filtering processes related to soil carbon and nitrogen contents could play a dominant role in structuring bacterial communities along the elevational gradient. Frontiers Media S.A. 2015-06-09 /pmc/articles/PMC4493907/ /pubmed/26217308 http://dx.doi.org/10.3389/fmicb.2015.00582 Text en Copyright © 2015 Shen, Ni, Liang, Wang and Chu. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Shen, Congcong
Ni, Yingying
Liang, Wenju
Wang, Jianjun
Chu, Haiyan
Distinct soil bacterial communities along a small-scale elevational gradient in alpine tundra
title Distinct soil bacterial communities along a small-scale elevational gradient in alpine tundra
title_full Distinct soil bacterial communities along a small-scale elevational gradient in alpine tundra
title_fullStr Distinct soil bacterial communities along a small-scale elevational gradient in alpine tundra
title_full_unstemmed Distinct soil bacterial communities along a small-scale elevational gradient in alpine tundra
title_short Distinct soil bacterial communities along a small-scale elevational gradient in alpine tundra
title_sort distinct soil bacterial communities along a small-scale elevational gradient in alpine tundra
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4493907/
https://www.ncbi.nlm.nih.gov/pubmed/26217308
http://dx.doi.org/10.3389/fmicb.2015.00582
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