Cargando…
The striking and unexpected cytogenetic diversity of genus Tanacetum L. (Asteraceae): a cytometric and fluorescent in situ hybridisation study of Iranian taxa
BACKGROUND: Although karyologically well studied, the genus Tanacetum (Asteraceae) is poorly known from the perspective of molecular cytogenetics. The prevalence of polyploidy, including odd ploidy warranted an extensive cytogenetic study. We studied several species native to Iran, one of the most i...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4494159/ https://www.ncbi.nlm.nih.gov/pubmed/26152193 http://dx.doi.org/10.1186/s12870-015-0564-8 |
_version_ | 1782380034092171264 |
---|---|
author | Olanj, Nayyereh Garnatje, Teresa Sonboli, Ali Vallès, Joan Garcia, Sònia |
author_facet | Olanj, Nayyereh Garnatje, Teresa Sonboli, Ali Vallès, Joan Garcia, Sònia |
author_sort | Olanj, Nayyereh |
collection | PubMed |
description | BACKGROUND: Although karyologically well studied, the genus Tanacetum (Asteraceae) is poorly known from the perspective of molecular cytogenetics. The prevalence of polyploidy, including odd ploidy warranted an extensive cytogenetic study. We studied several species native to Iran, one of the most important centres of diversity of the genus. We aimed to characterise Tanacetum genomes through fluorochrome banding, fluorescent in situ hybridisation (FISH) of rRNA genes and the assessment of genome size by flow cytometry. We appraise the effect of polyploidy and evaluate the existence of intraspecific variation based on the number and distribution of GC-rich bands and rDNA loci. Finally, we infer ancestral genome size and other cytogenetic traits considering phylogenetic relationships within the genus. RESULTS: We report first genome size (2C) estimates ranging from 3.84 to 24.87 pg representing about 11 % of those recognised for the genus. We found striking cytogenetic diversity both in the number of GC-rich bands and rDNA loci. There is variation even at the population level and some species have undergone massive heterochromatic or rDNA amplification. Certain morphometric data, such as pollen size or inflorescence architecture, bear some relationship with genome size. Reconstruction of ancestral genome size, number of CMA+ bands and number of rDNA loci show that ups and downs have occurred during the evolution of these traits, although genome size has mostly increased and the number of CMA+ bands and rDNA loci have decreased in present-day taxa compared with ancestral values. CONCLUSIONS: Tanacetum genomes are highly unstable in the number of GC-rich bands and rDNA loci, although some patterns can be established at the diploid and tetraploid levels. In particular, aneuploid taxa and some odd ploidy species show greater cytogenetic instability than the rest of the genus. We have also confirmed a linked rDNA arrangement for all the studied Tanacetum species. The labile scenario found in Tanacetum proves that some cytogenetic features previously regarded as relatively constant, or even diagnostic, can display high variability, which is better interpreted within a phylogenetic context. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12870-015-0564-8) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4494159 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-44941592015-07-08 The striking and unexpected cytogenetic diversity of genus Tanacetum L. (Asteraceae): a cytometric and fluorescent in situ hybridisation study of Iranian taxa Olanj, Nayyereh Garnatje, Teresa Sonboli, Ali Vallès, Joan Garcia, Sònia BMC Plant Biol Research Article BACKGROUND: Although karyologically well studied, the genus Tanacetum (Asteraceae) is poorly known from the perspective of molecular cytogenetics. The prevalence of polyploidy, including odd ploidy warranted an extensive cytogenetic study. We studied several species native to Iran, one of the most important centres of diversity of the genus. We aimed to characterise Tanacetum genomes through fluorochrome banding, fluorescent in situ hybridisation (FISH) of rRNA genes and the assessment of genome size by flow cytometry. We appraise the effect of polyploidy and evaluate the existence of intraspecific variation based on the number and distribution of GC-rich bands and rDNA loci. Finally, we infer ancestral genome size and other cytogenetic traits considering phylogenetic relationships within the genus. RESULTS: We report first genome size (2C) estimates ranging from 3.84 to 24.87 pg representing about 11 % of those recognised for the genus. We found striking cytogenetic diversity both in the number of GC-rich bands and rDNA loci. There is variation even at the population level and some species have undergone massive heterochromatic or rDNA amplification. Certain morphometric data, such as pollen size or inflorescence architecture, bear some relationship with genome size. Reconstruction of ancestral genome size, number of CMA+ bands and number of rDNA loci show that ups and downs have occurred during the evolution of these traits, although genome size has mostly increased and the number of CMA+ bands and rDNA loci have decreased in present-day taxa compared with ancestral values. CONCLUSIONS: Tanacetum genomes are highly unstable in the number of GC-rich bands and rDNA loci, although some patterns can be established at the diploid and tetraploid levels. In particular, aneuploid taxa and some odd ploidy species show greater cytogenetic instability than the rest of the genus. We have also confirmed a linked rDNA arrangement for all the studied Tanacetum species. The labile scenario found in Tanacetum proves that some cytogenetic features previously regarded as relatively constant, or even diagnostic, can display high variability, which is better interpreted within a phylogenetic context. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12870-015-0564-8) contains supplementary material, which is available to authorized users. BioMed Central 2015-07-08 /pmc/articles/PMC4494159/ /pubmed/26152193 http://dx.doi.org/10.1186/s12870-015-0564-8 Text en © Olanj et al. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Olanj, Nayyereh Garnatje, Teresa Sonboli, Ali Vallès, Joan Garcia, Sònia The striking and unexpected cytogenetic diversity of genus Tanacetum L. (Asteraceae): a cytometric and fluorescent in situ hybridisation study of Iranian taxa |
title | The striking and unexpected cytogenetic diversity of genus Tanacetum L. (Asteraceae): a cytometric and fluorescent in situ hybridisation study of Iranian taxa |
title_full | The striking and unexpected cytogenetic diversity of genus Tanacetum L. (Asteraceae): a cytometric and fluorescent in situ hybridisation study of Iranian taxa |
title_fullStr | The striking and unexpected cytogenetic diversity of genus Tanacetum L. (Asteraceae): a cytometric and fluorescent in situ hybridisation study of Iranian taxa |
title_full_unstemmed | The striking and unexpected cytogenetic diversity of genus Tanacetum L. (Asteraceae): a cytometric and fluorescent in situ hybridisation study of Iranian taxa |
title_short | The striking and unexpected cytogenetic diversity of genus Tanacetum L. (Asteraceae): a cytometric and fluorescent in situ hybridisation study of Iranian taxa |
title_sort | striking and unexpected cytogenetic diversity of genus tanacetum l. (asteraceae): a cytometric and fluorescent in situ hybridisation study of iranian taxa |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4494159/ https://www.ncbi.nlm.nih.gov/pubmed/26152193 http://dx.doi.org/10.1186/s12870-015-0564-8 |
work_keys_str_mv | AT olanjnayyereh thestrikingandunexpectedcytogeneticdiversityofgenustanacetumlasteraceaeacytometricandfluorescentinsituhybridisationstudyofiraniantaxa AT garnatjeteresa thestrikingandunexpectedcytogeneticdiversityofgenustanacetumlasteraceaeacytometricandfluorescentinsituhybridisationstudyofiraniantaxa AT sonboliali thestrikingandunexpectedcytogeneticdiversityofgenustanacetumlasteraceaeacytometricandfluorescentinsituhybridisationstudyofiraniantaxa AT vallesjoan thestrikingandunexpectedcytogeneticdiversityofgenustanacetumlasteraceaeacytometricandfluorescentinsituhybridisationstudyofiraniantaxa AT garciasonia thestrikingandunexpectedcytogeneticdiversityofgenustanacetumlasteraceaeacytometricandfluorescentinsituhybridisationstudyofiraniantaxa AT olanjnayyereh strikingandunexpectedcytogeneticdiversityofgenustanacetumlasteraceaeacytometricandfluorescentinsituhybridisationstudyofiraniantaxa AT garnatjeteresa strikingandunexpectedcytogeneticdiversityofgenustanacetumlasteraceaeacytometricandfluorescentinsituhybridisationstudyofiraniantaxa AT sonboliali strikingandunexpectedcytogeneticdiversityofgenustanacetumlasteraceaeacytometricandfluorescentinsituhybridisationstudyofiraniantaxa AT vallesjoan strikingandunexpectedcytogeneticdiversityofgenustanacetumlasteraceaeacytometricandfluorescentinsituhybridisationstudyofiraniantaxa AT garciasonia strikingandunexpectedcytogeneticdiversityofgenustanacetumlasteraceaeacytometricandfluorescentinsituhybridisationstudyofiraniantaxa |