Cargando…

Towards Automated Annotation of Benthic Survey Images: Variability of Human Experts and Operational Modes of Automation

Global climate change and other anthropogenic stressors have heightened the need to rapidly characterize ecological changes in marine benthic communities across large scales. Digital photography enables rapid collection of survey images to meet this need, but the subsequent image annotation is typic...

Descripción completa

Detalles Bibliográficos
Autores principales:	Beijbom, Oscar, Edmunds, Peter J., Roelfsema, Chris, Smith, Jennifer, Kline, David I., Neal, Benjamin P., Dunlap, Matthew J., Moriarty, Vincent, Fan, Tung-Yung, Tan, Chih-Jui, Chan, Stephen, Treibitz, Tali, Gamst, Anthony, Mitchell, B. Greg, Kriegman, David
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2015
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4496057/ https://www.ncbi.nlm.nih.gov/pubmed/26154157 http://dx.doi.org/10.1371/journal.pone.0130312

Ejemplares similares

Improving Automated Annotation of Benthic Survey Images Using Wide-band Fluorescence
por: Beijbom, Oscar, et al.
Publicado: (2016)

Wide Field-of-View Fluorescence Imaging of Coral Reefs
por: Treibitz, Tali, et al.
Publicado: (2015)

Caribbean massive corals not recovering from repeated thermal stress events during 2005–2013
por: Neal, Benjamin Paul, et al.
Publicado: (2017)

Underwater microscopy for in situ studies of benthic ecosystems
por: Mullen, Andrew D., et al.
Publicado: (2016)

Studying the movement behavior of benthic macroinvertebrates with automated video tracking
por: Augusiak, Jacqueline, et al.
Publicado: (2015)

Automated annotation of human centromeres with HORmon
por: Kunyavskaya, Olga, et al.
Publicado: (2022)

Plastaumatic: Automating plastome assembly and annotation
por: Chen, Wenyi, et al.
Publicado: (2022)

Expert scripting and automation for SQL Server DBAs
por: Carter, Peter A
Publicado: (2016)

Electroanatomic mapping of atrial tachycardia—Manual vs automated annotation()
por: Knecht, Sven, et al.
Publicado: (2016)

An automated protein annotation filter for integrating web-based annotation tools
por: Saravanan, Vijayakumar, et al.
Publicado: (2007)

Automated annotation of birdsong with a neural network that segments spectrograms
por: Cohen, Yarden, et al.
Publicado: (2022)

BASys: a web server for automated bacterial genome annotation
por: Van Domselaar, Gary H., et al.
Publicado: (2005)

A diver-operated hyperspectral imaging and topographic surveying system for automated mapping of benthic habitats
por: Chennu, Arjun, et al.
Publicado: (2017)

EOS Winston: Expert Systems for Automated Diagnosis and Remediation
por: Arora, Ishank
Publicado: (2019)

The IGS Standard Operating Procedure for Automated Prokaryotic Annotation
por: Galens, Kevin, et al.
Publicado: (2011)

Evaluation of Three Automated Genome Annotations for Halorhabdus utahensis
por: Bakke, Peter, et al.
Publicado: (2009)

Automated annotation of chemical names in the literature with tunable accuracy
por: Zhang, Jun D, et al.
Publicado: (2011)

Automated Ontological Gene Annotation for Computing Disease Similarity
por: Mathur, Sachin, et al.
Publicado: (2010)

BEACON: automated tool for Bacterial GEnome Annotation ComparisON
por: Kalkatawi, Manal, et al.
Publicado: (2015)

A Factor Graph Approach to Automated GO Annotation
por: Spetale, Flavio E., et al.
Publicado: (2016)

GapMind: Automated Annotation of Amino Acid Biosynthesis
por: Price, Morgan N., et al.
Publicado: (2020)

Cogito: automated and generic comparison of annotated genomic intervals
por: Bürger, Annika, et al.
Publicado: (2022)

An automated model annotation system (AMAS) for SBML models
por: Shin, Woosub, et al.
Publicado: (2023)

An Automated Model Annotation System (AMAS) for SBML Models
por: Shin, Woosub, et al.
Publicado: (2023)

Sleep spindle detection: crowdsourcing and evaluating performance of experts, non-experts, and automated methods
por: Warby, Simon C., et al.
Publicado: (2014)

Performance of single and multi-atlas based automated landmarking methods compared to expert annotations in volumetric microCT datasets of mouse mandibles
por: Young, Ryan, et al.
Publicado: (2015)

Exploiting labels from multiple experts in automated sleep scoring
por: Nasiri, Samaneh, et al.
Publicado: (2023)

TriAnnot: A Versatile and High Performance Pipeline for the Automated Annotation of Plant Genomes
por: Leroy, Philippe, et al.
Publicado: (2012)

bpRNA: large-scale automated annotation and analysis of RNA secondary structure
por: Danaee, Padideh, et al.
Publicado: (2018)

eggNOG: automated construction and annotation of orthologous groups of genes
por: Jensen, Lars Juhl, et al.
Publicado: (2008)

Evolutionarily Conserved Substrate Substructures for Automated Annotation of Enzyme Superfamilies
por: Chiang, Ranyee A., et al.
Publicado: (2008)

Application and evaluation of automated semantic annotation of gene expression experiments
por: French, Leon, et al.
Publicado: (2009)

SHIRAZ: an automated histology image annotation system for zebrafish phenomics
por: Canada, Brian A., et al.
Publicado: (2010)

Automated peptide mapping and protein-topographical annotation of proteomics data
por: Videm, Pavankumar, et al.
Publicado: (2014)

A semi-automated genome annotation comparison and integration scheme
por: Liu, Zhe, et al.
Publicado: (2013)

Fuzzy Emotional Semantic Analysis and Automated Annotation of Scene Images
por: Cao, Jianfang, et al.
Publicado: (2015)

JIND: joint integration and discrimination for automated single-cell annotation
por: Goyal, Mohit, et al.
Publicado: (2022)

Pipette cleaning in automated systems
por: Severns, M. L., et al.
Publicado: (1986)

Automated Image Analysis for the Detection of Benthic Crustaceans and Bacterial Mat Coverage Using the VENUS Undersea Cabled Network
por: Aguzzi, Jacopo, et al.
Publicado: (2011)

scAnnotate: an automated cell-type annotation tool for single-cell RNA-sequencing data
por: Ji, Xiangling, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_4mn354uflg6olce8e421i08l82