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CGMD: An integrated database of cancer genes and markers
Integrating cancer genes and markers with experimental evidence might provide valuable information for the further investigation of crosstalk between tumor genes and markers in cancer biology. To achieve this objective, we developed a database known as the Cancer Gene Marker Database (CGMD), which i...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4498195/ https://www.ncbi.nlm.nih.gov/pubmed/26160459 http://dx.doi.org/10.1038/srep12035 |
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author | Pradeepkiran, Jangampalli Adi Sainath, Sri Bhashyam Kramthi Kumar, Konidala Balasubramanyam, Lokanada Vidya Prabhakar, Kodali Bhaskar, Matcha |
author_facet | Pradeepkiran, Jangampalli Adi Sainath, Sri Bhashyam Kramthi Kumar, Konidala Balasubramanyam, Lokanada Vidya Prabhakar, Kodali Bhaskar, Matcha |
author_sort | Pradeepkiran, Jangampalli Adi |
collection | PubMed |
description | Integrating cancer genes and markers with experimental evidence might provide valuable information for the further investigation of crosstalk between tumor genes and markers in cancer biology. To achieve this objective, we developed a database known as the Cancer Gene Marker Database (CGMD), which integrates data on tumor genes and markers based on experimental evidence. The major goal of CGMD is to provide the following: 1) current systematic treatment approaches and recent advances in different cancer treatments; 2) the aggregation of different genes and markers by their molecular characteristics and pathway associations; and 3) free access to the data compiled by CGMD at http://cgmd.in/. The database consists of 309 genes and 206 markers, as well as a list of 40 different human cancers, with detailed descriptions of all characterized markers. CGMD provides complete cancer annotations and molecular descriptions of cancer genes and markers such as CpG islands, promoters, exons, PDB structures, active sites and domains. |
format | Online Article Text |
id | pubmed-4498195 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-44981952015-07-13 CGMD: An integrated database of cancer genes and markers Pradeepkiran, Jangampalli Adi Sainath, Sri Bhashyam Kramthi Kumar, Konidala Balasubramanyam, Lokanada Vidya Prabhakar, Kodali Bhaskar, Matcha Sci Rep Article Integrating cancer genes and markers with experimental evidence might provide valuable information for the further investigation of crosstalk between tumor genes and markers in cancer biology. To achieve this objective, we developed a database known as the Cancer Gene Marker Database (CGMD), which integrates data on tumor genes and markers based on experimental evidence. The major goal of CGMD is to provide the following: 1) current systematic treatment approaches and recent advances in different cancer treatments; 2) the aggregation of different genes and markers by their molecular characteristics and pathway associations; and 3) free access to the data compiled by CGMD at http://cgmd.in/. The database consists of 309 genes and 206 markers, as well as a list of 40 different human cancers, with detailed descriptions of all characterized markers. CGMD provides complete cancer annotations and molecular descriptions of cancer genes and markers such as CpG islands, promoters, exons, PDB structures, active sites and domains. Nature Publishing Group 2015-07-10 /pmc/articles/PMC4498195/ /pubmed/26160459 http://dx.doi.org/10.1038/srep12035 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Pradeepkiran, Jangampalli Adi Sainath, Sri Bhashyam Kramthi Kumar, Konidala Balasubramanyam, Lokanada Vidya Prabhakar, Kodali Bhaskar, Matcha CGMD: An integrated database of cancer genes and markers |
title | CGMD: An integrated database of cancer genes and markers |
title_full | CGMD: An integrated database of cancer genes and markers |
title_fullStr | CGMD: An integrated database of cancer genes and markers |
title_full_unstemmed | CGMD: An integrated database of cancer genes and markers |
title_short | CGMD: An integrated database of cancer genes and markers |
title_sort | cgmd: an integrated database of cancer genes and markers |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4498195/ https://www.ncbi.nlm.nih.gov/pubmed/26160459 http://dx.doi.org/10.1038/srep12035 |
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