Cargando…

Monitoring Conformational Changes in the NDM-1 Metallo-β-lactamase by (19)F NMR Spectroscopy**

The New Delhi metallo-β-lactamase (NDM-1) is involved in the emerging antibiotic resistance problem. Development of metallo-β-lactamases (MBLs) inhibitors has proven challenging, due to their conformational flexibility. Here we report site-selective labeling of NDM-1 with 1,1,1-trifluoro-3-bromo ace...

Descripción completa

Detalles Bibliográficos
Autores principales: Rydzik, Anna M, Brem, Jürgen, van Berkel, Sander S, Pfeffer, Inga, Makena, Anne, Claridge, Timothy D W, Schofield, Christopher J
Formato: Online Artículo Texto
Lenguaje:English
Publicado: WILEY-VCH Verlag 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4499255/
https://www.ncbi.nlm.nih.gov/pubmed/24615874
http://dx.doi.org/10.1002/anie.201310866
_version_ 1782380757792063488
author Rydzik, Anna M
Brem, Jürgen
van Berkel, Sander S
Pfeffer, Inga
Makena, Anne
Claridge, Timothy D W
Schofield, Christopher J
author_facet Rydzik, Anna M
Brem, Jürgen
van Berkel, Sander S
Pfeffer, Inga
Makena, Anne
Claridge, Timothy D W
Schofield, Christopher J
author_sort Rydzik, Anna M
collection PubMed
description The New Delhi metallo-β-lactamase (NDM-1) is involved in the emerging antibiotic resistance problem. Development of metallo-β-lactamases (MBLs) inhibitors has proven challenging, due to their conformational flexibility. Here we report site-selective labeling of NDM-1 with 1,1,1-trifluoro-3-bromo acetone (BFA), and its use to study binding events and conformational changes upon ligand–metal binding using (19)F NMR spectroscopy. The results demonstrate different modes of binding of known NDM-1 inhibitors, including l- and D-captopril by monitoring the changing chemical environment of the active-site loop of NDM-1. The method described will be applicable to other MBLs and more generally to monitoring ligand-induced conformational changes.
format Online
Article
Text
id pubmed-4499255
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher WILEY-VCH Verlag
record_format MEDLINE/PubMed
spelling pubmed-44992552015-07-16 Monitoring Conformational Changes in the NDM-1 Metallo-β-lactamase by (19)F NMR Spectroscopy** Rydzik, Anna M Brem, Jürgen van Berkel, Sander S Pfeffer, Inga Makena, Anne Claridge, Timothy D W Schofield, Christopher J Angew Chem Int Ed Engl Communications The New Delhi metallo-β-lactamase (NDM-1) is involved in the emerging antibiotic resistance problem. Development of metallo-β-lactamases (MBLs) inhibitors has proven challenging, due to their conformational flexibility. Here we report site-selective labeling of NDM-1 with 1,1,1-trifluoro-3-bromo acetone (BFA), and its use to study binding events and conformational changes upon ligand–metal binding using (19)F NMR spectroscopy. The results demonstrate different modes of binding of known NDM-1 inhibitors, including l- and D-captopril by monitoring the changing chemical environment of the active-site loop of NDM-1. The method described will be applicable to other MBLs and more generally to monitoring ligand-induced conformational changes. WILEY-VCH Verlag 2014-03-17 2014-02-24 /pmc/articles/PMC4499255/ /pubmed/24615874 http://dx.doi.org/10.1002/anie.201310866 Text en © 2014 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Communications
Rydzik, Anna M
Brem, Jürgen
van Berkel, Sander S
Pfeffer, Inga
Makena, Anne
Claridge, Timothy D W
Schofield, Christopher J
Monitoring Conformational Changes in the NDM-1 Metallo-β-lactamase by (19)F NMR Spectroscopy**
title Monitoring Conformational Changes in the NDM-1 Metallo-β-lactamase by (19)F NMR Spectroscopy**
title_full Monitoring Conformational Changes in the NDM-1 Metallo-β-lactamase by (19)F NMR Spectroscopy**
title_fullStr Monitoring Conformational Changes in the NDM-1 Metallo-β-lactamase by (19)F NMR Spectroscopy**
title_full_unstemmed Monitoring Conformational Changes in the NDM-1 Metallo-β-lactamase by (19)F NMR Spectroscopy**
title_short Monitoring Conformational Changes in the NDM-1 Metallo-β-lactamase by (19)F NMR Spectroscopy**
title_sort monitoring conformational changes in the ndm-1 metallo-β-lactamase by (19)f nmr spectroscopy**
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4499255/
https://www.ncbi.nlm.nih.gov/pubmed/24615874
http://dx.doi.org/10.1002/anie.201310866
work_keys_str_mv AT rydzikannam monitoringconformationalchangesinthendm1metalloblactamaseby19fnmrspectroscopy
AT bremjurgen monitoringconformationalchangesinthendm1metalloblactamaseby19fnmrspectroscopy
AT vanberkelsanders monitoringconformationalchangesinthendm1metalloblactamaseby19fnmrspectroscopy
AT pfefferinga monitoringconformationalchangesinthendm1metalloblactamaseby19fnmrspectroscopy
AT makenaanne monitoringconformationalchangesinthendm1metalloblactamaseby19fnmrspectroscopy
AT claridgetimothydw monitoringconformationalchangesinthendm1metalloblactamaseby19fnmrspectroscopy
AT schofieldchristopherj monitoringconformationalchangesinthendm1metalloblactamaseby19fnmrspectroscopy