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Evaluation of farm-level parameters derived from animal movements for use in risk-based surveillance programmes of cattle in Switzerland
BACKGROUND: This study focused on the descriptive analysis of cattle movements and farm-level parameters derived from cattle movements, which are considered to be generically suitable for risk-based surveillance systems in Switzerland for diseases where animal movements constitute an important risk...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4499910/ https://www.ncbi.nlm.nih.gov/pubmed/26170195 http://dx.doi.org/10.1186/s12917-015-0468-8 |
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author | Schärrer, Sara Widgren, Stefan Schwermer, Heinzpeter Lindberg, Ann Vidondo, Beatriz Zinsstag, Jakob Reist, Martin |
author_facet | Schärrer, Sara Widgren, Stefan Schwermer, Heinzpeter Lindberg, Ann Vidondo, Beatriz Zinsstag, Jakob Reist, Martin |
author_sort | Schärrer, Sara |
collection | PubMed |
description | BACKGROUND: This study focused on the descriptive analysis of cattle movements and farm-level parameters derived from cattle movements, which are considered to be generically suitable for risk-based surveillance systems in Switzerland for diseases where animal movements constitute an important risk pathway. METHODS: A framework was developed to select farms for surveillance based on a risk score summarizing 5 parameters. The proposed framework was validated using data from the bovine viral diarrhoea (BVD) surveillance programme in 2013. RESULTS: A cumulative score was calculated per farm, including the following parameters; the maximum monthly ingoing contact chain (in 2012), the average number of animals per incoming movement, use of mixed alpine pastures and the number of weeks in 2012 a farm had movements registered. The final score for the farm depended on the distribution of the parameters. Different cut offs; 50, 90, 95 and 99 %, were explored. The final scores ranged between 0 and 5. Validation of the scores against results from the BVD surveillance programme 2013 gave promising results for setting the cut off for each of the five selected farm level criteria at the 50th percentile. Restricting testing to farms with a score ≥ 2 would have resulted in the same number of detected BVD positive farms as testing all farms, i.e., the outcome of the 2013 surveillance programme could have been reached with a smaller survey. CONCLUSIONS: The seasonality and time dependency of the activity of single farms in the networks requires a careful assessment of the actual time period included to determine farm level criteria. However, selecting farms in the sample for risk-based surveillance can be optimized with the proposed scoring system. The system was validated using data from the BVD eradication program. The proposed method is a promising framework for the selection of farms according to the risk of infection based on animal movements. |
format | Online Article Text |
id | pubmed-4499910 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-44999102015-07-14 Evaluation of farm-level parameters derived from animal movements for use in risk-based surveillance programmes of cattle in Switzerland Schärrer, Sara Widgren, Stefan Schwermer, Heinzpeter Lindberg, Ann Vidondo, Beatriz Zinsstag, Jakob Reist, Martin BMC Vet Res Research Article BACKGROUND: This study focused on the descriptive analysis of cattle movements and farm-level parameters derived from cattle movements, which are considered to be generically suitable for risk-based surveillance systems in Switzerland for diseases where animal movements constitute an important risk pathway. METHODS: A framework was developed to select farms for surveillance based on a risk score summarizing 5 parameters. The proposed framework was validated using data from the bovine viral diarrhoea (BVD) surveillance programme in 2013. RESULTS: A cumulative score was calculated per farm, including the following parameters; the maximum monthly ingoing contact chain (in 2012), the average number of animals per incoming movement, use of mixed alpine pastures and the number of weeks in 2012 a farm had movements registered. The final score for the farm depended on the distribution of the parameters. Different cut offs; 50, 90, 95 and 99 %, were explored. The final scores ranged between 0 and 5. Validation of the scores against results from the BVD surveillance programme 2013 gave promising results for setting the cut off for each of the five selected farm level criteria at the 50th percentile. Restricting testing to farms with a score ≥ 2 would have resulted in the same number of detected BVD positive farms as testing all farms, i.e., the outcome of the 2013 surveillance programme could have been reached with a smaller survey. CONCLUSIONS: The seasonality and time dependency of the activity of single farms in the networks requires a careful assessment of the actual time period included to determine farm level criteria. However, selecting farms in the sample for risk-based surveillance can be optimized with the proposed scoring system. The system was validated using data from the BVD eradication program. The proposed method is a promising framework for the selection of farms according to the risk of infection based on animal movements. BioMed Central 2015-07-14 /pmc/articles/PMC4499910/ /pubmed/26170195 http://dx.doi.org/10.1186/s12917-015-0468-8 Text en © Schärrer et al. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Schärrer, Sara Widgren, Stefan Schwermer, Heinzpeter Lindberg, Ann Vidondo, Beatriz Zinsstag, Jakob Reist, Martin Evaluation of farm-level parameters derived from animal movements for use in risk-based surveillance programmes of cattle in Switzerland |
title | Evaluation of farm-level parameters derived from animal movements for use in risk-based surveillance programmes of cattle in Switzerland |
title_full | Evaluation of farm-level parameters derived from animal movements for use in risk-based surveillance programmes of cattle in Switzerland |
title_fullStr | Evaluation of farm-level parameters derived from animal movements for use in risk-based surveillance programmes of cattle in Switzerland |
title_full_unstemmed | Evaluation of farm-level parameters derived from animal movements for use in risk-based surveillance programmes of cattle in Switzerland |
title_short | Evaluation of farm-level parameters derived from animal movements for use in risk-based surveillance programmes of cattle in Switzerland |
title_sort | evaluation of farm-level parameters derived from animal movements for use in risk-based surveillance programmes of cattle in switzerland |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4499910/ https://www.ncbi.nlm.nih.gov/pubmed/26170195 http://dx.doi.org/10.1186/s12917-015-0468-8 |
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