Cargando…
A genetic toolkit for tagging intronic MiMIC containing genes
Previously, we described a large collection of Minos-Mediated Integration Cassettes (MiMICs) that contain two phiC31 recombinase target sites and allow the generation of a new exon that encodes a protein tag when the MiMIC is inserted in a codon intron (Nagarkar-Jaiswal et al., 2015). These modified...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4499919/ https://www.ncbi.nlm.nih.gov/pubmed/26102525 http://dx.doi.org/10.7554/eLife.08469 |
_version_ | 1782380856210358272 |
---|---|
author | Nagarkar-Jaiswal, Sonal DeLuca, Steven Z Lee, Pei-Tseng Lin, Wen-Wen Pan, Hongling Zuo, Zhongyuan Lv, Jiangxing Spradling, Allan C Bellen, Hugo J |
author_facet | Nagarkar-Jaiswal, Sonal DeLuca, Steven Z Lee, Pei-Tseng Lin, Wen-Wen Pan, Hongling Zuo, Zhongyuan Lv, Jiangxing Spradling, Allan C Bellen, Hugo J |
author_sort | Nagarkar-Jaiswal, Sonal |
collection | PubMed |
description | Previously, we described a large collection of Minos-Mediated Integration Cassettes (MiMICs) that contain two phiC31 recombinase target sites and allow the generation of a new exon that encodes a protein tag when the MiMIC is inserted in a codon intron (Nagarkar-Jaiswal et al., 2015). These modified genes permit numerous applications including assessment of protein expression pattern, identification of protein interaction partners by immunoprecipitation followed by mass spec, and reversible removal of the tagged protein in any tissue. At present, these conversions remain time and labor-intensive as they require embryos to be injected with plasmid DNA containing the exon tag. In this study, we describe a simple and reliable genetic strategy to tag genes/proteins that contain MiMIC insertions using an integrated exon encoding GFP flanked by FRT sequences. We document the efficiency and tag 60 mostly uncharacterized genes. DOI: http://dx.doi.org/10.7554/eLife.08469.001 |
format | Online Article Text |
id | pubmed-4499919 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-44999192015-07-14 A genetic toolkit for tagging intronic MiMIC containing genes Nagarkar-Jaiswal, Sonal DeLuca, Steven Z Lee, Pei-Tseng Lin, Wen-Wen Pan, Hongling Zuo, Zhongyuan Lv, Jiangxing Spradling, Allan C Bellen, Hugo J eLife Cell Biology Previously, we described a large collection of Minos-Mediated Integration Cassettes (MiMICs) that contain two phiC31 recombinase target sites and allow the generation of a new exon that encodes a protein tag when the MiMIC is inserted in a codon intron (Nagarkar-Jaiswal et al., 2015). These modified genes permit numerous applications including assessment of protein expression pattern, identification of protein interaction partners by immunoprecipitation followed by mass spec, and reversible removal of the tagged protein in any tissue. At present, these conversions remain time and labor-intensive as they require embryos to be injected with plasmid DNA containing the exon tag. In this study, we describe a simple and reliable genetic strategy to tag genes/proteins that contain MiMIC insertions using an integrated exon encoding GFP flanked by FRT sequences. We document the efficiency and tag 60 mostly uncharacterized genes. DOI: http://dx.doi.org/10.7554/eLife.08469.001 eLife Sciences Publications, Ltd 2015-06-23 /pmc/articles/PMC4499919/ /pubmed/26102525 http://dx.doi.org/10.7554/eLife.08469 Text en © 2015, Nagarkar-Jaiswal et al http://creativecommons.org/licenses/by/4.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Cell Biology Nagarkar-Jaiswal, Sonal DeLuca, Steven Z Lee, Pei-Tseng Lin, Wen-Wen Pan, Hongling Zuo, Zhongyuan Lv, Jiangxing Spradling, Allan C Bellen, Hugo J A genetic toolkit for tagging intronic MiMIC containing genes |
title | A genetic toolkit for tagging intronic MiMIC containing genes |
title_full | A genetic toolkit for tagging intronic MiMIC containing genes |
title_fullStr | A genetic toolkit for tagging intronic MiMIC containing genes |
title_full_unstemmed | A genetic toolkit for tagging intronic MiMIC containing genes |
title_short | A genetic toolkit for tagging intronic MiMIC containing genes |
title_sort | genetic toolkit for tagging intronic mimic containing genes |
topic | Cell Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4499919/ https://www.ncbi.nlm.nih.gov/pubmed/26102525 http://dx.doi.org/10.7554/eLife.08469 |
work_keys_str_mv | AT nagarkarjaiswalsonal agenetictoolkitfortaggingintronicmimiccontaininggenes AT delucastevenz agenetictoolkitfortaggingintronicmimiccontaininggenes AT leepeitseng agenetictoolkitfortaggingintronicmimiccontaininggenes AT linwenwen agenetictoolkitfortaggingintronicmimiccontaininggenes AT panhongling agenetictoolkitfortaggingintronicmimiccontaininggenes AT zuozhongyuan agenetictoolkitfortaggingintronicmimiccontaininggenes AT lvjiangxing agenetictoolkitfortaggingintronicmimiccontaininggenes AT spradlingallanc agenetictoolkitfortaggingintronicmimiccontaininggenes AT bellenhugoj agenetictoolkitfortaggingintronicmimiccontaininggenes AT nagarkarjaiswalsonal genetictoolkitfortaggingintronicmimiccontaininggenes AT delucastevenz genetictoolkitfortaggingintronicmimiccontaininggenes AT leepeitseng genetictoolkitfortaggingintronicmimiccontaininggenes AT linwenwen genetictoolkitfortaggingintronicmimiccontaininggenes AT panhongling genetictoolkitfortaggingintronicmimiccontaininggenes AT zuozhongyuan genetictoolkitfortaggingintronicmimiccontaininggenes AT lvjiangxing genetictoolkitfortaggingintronicmimiccontaininggenes AT spradlingallanc genetictoolkitfortaggingintronicmimiccontaininggenes AT bellenhugoj genetictoolkitfortaggingintronicmimiccontaininggenes |