Cargando…
Comparison of two real-time PCR assays for the detection of malaria parasites from hemolytic blood samples – Short communication
We compared the performance of an in-house and a commercial malaria polymerase chain reaction (PCR) assay using freeze–thawed hemolytic blood samples. A total of 116 freeze–thawed ethylenediamine tetraacetic acid (EDTA) blood samples of patients with suspicion of malaria were analyzed by an in-house...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Akadémiai Kiadó
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4500067/ https://www.ncbi.nlm.nih.gov/pubmed/26185684 http://dx.doi.org/10.1556/1886.2015.00006 |
_version_ | 1782380883622232064 |
---|---|
author | Hagen, Ralf Matthias Hinz, Rebecca Tannich, Egbert Frickmann, Hagen |
author_facet | Hagen, Ralf Matthias Hinz, Rebecca Tannich, Egbert Frickmann, Hagen |
author_sort | Hagen, Ralf Matthias |
collection | PubMed |
description | We compared the performance of an in-house and a commercial malaria polymerase chain reaction (PCR) assay using freeze–thawed hemolytic blood samples. A total of 116 freeze–thawed ethylenediamine tetraacetic acid (EDTA) blood samples of patients with suspicion of malaria were analyzed by an in-house as well as by a commercially available real-time PCR. Concordant malaria negative PCR results were reported for 39 samples and malaria-positive PCR results for 67 samples. The in-house assay further detected one case of Plasmodium falciparum infection, which was negative in the commercial assay as well as five cases of P. falciparum malaria and three cases of Plasmodium vivax malaria, which showed sample inhibition in the commercial assay. The commercial malaria assay was positive in spite of a negative in-house PCR result in one case. In all concordant results, cycle threshold values of P. falciparum-positive samples were lower in the commercial PCR than in the in-house assay. Although Ct values of the commercial PCR kit suggest higher sensitivity in case of concordant results, it is prone to inhibition if it is applied to hemolytic freeze–thawed blood samples. The number of misidentifications was, however, identical for both real-time PCR assays. |
format | Online Article Text |
id | pubmed-4500067 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Akadémiai Kiadó |
record_format | MEDLINE/PubMed |
spelling | pubmed-45000672015-07-16 Comparison of two real-time PCR assays for the detection of malaria parasites from hemolytic blood samples – Short communication Hagen, Ralf Matthias Hinz, Rebecca Tannich, Egbert Frickmann, Hagen Eur J Microbiol Immunol (Bp) Original Article We compared the performance of an in-house and a commercial malaria polymerase chain reaction (PCR) assay using freeze–thawed hemolytic blood samples. A total of 116 freeze–thawed ethylenediamine tetraacetic acid (EDTA) blood samples of patients with suspicion of malaria were analyzed by an in-house as well as by a commercially available real-time PCR. Concordant malaria negative PCR results were reported for 39 samples and malaria-positive PCR results for 67 samples. The in-house assay further detected one case of Plasmodium falciparum infection, which was negative in the commercial assay as well as five cases of P. falciparum malaria and three cases of Plasmodium vivax malaria, which showed sample inhibition in the commercial assay. The commercial malaria assay was positive in spite of a negative in-house PCR result in one case. In all concordant results, cycle threshold values of P. falciparum-positive samples were lower in the commercial PCR than in the in-house assay. Although Ct values of the commercial PCR kit suggest higher sensitivity in case of concordant results, it is prone to inhibition if it is applied to hemolytic freeze–thawed blood samples. The number of misidentifications was, however, identical for both real-time PCR assays. Akadémiai Kiadó 2015-06-18 /pmc/articles/PMC4500067/ /pubmed/26185684 http://dx.doi.org/10.1556/1886.2015.00006 Text en © 2015, Akadémiai Kiadó, Budapest http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Hagen, Ralf Matthias Hinz, Rebecca Tannich, Egbert Frickmann, Hagen Comparison of two real-time PCR assays for the detection of malaria parasites from hemolytic blood samples – Short communication |
title | Comparison of two real-time PCR assays for the detection of malaria parasites from hemolytic blood samples – Short communication |
title_full | Comparison of two real-time PCR assays for the detection of malaria parasites from hemolytic blood samples – Short communication |
title_fullStr | Comparison of two real-time PCR assays for the detection of malaria parasites from hemolytic blood samples – Short communication |
title_full_unstemmed | Comparison of two real-time PCR assays for the detection of malaria parasites from hemolytic blood samples – Short communication |
title_short | Comparison of two real-time PCR assays for the detection of malaria parasites from hemolytic blood samples – Short communication |
title_sort | comparison of two real-time pcr assays for the detection of malaria parasites from hemolytic blood samples – short communication |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4500067/ https://www.ncbi.nlm.nih.gov/pubmed/26185684 http://dx.doi.org/10.1556/1886.2015.00006 |
work_keys_str_mv | AT hagenralfmatthias comparisonoftworealtimepcrassaysforthedetectionofmalariaparasitesfromhemolyticbloodsamplesshortcommunication AT hinzrebecca comparisonoftworealtimepcrassaysforthedetectionofmalariaparasitesfromhemolyticbloodsamplesshortcommunication AT tannichegbert comparisonoftworealtimepcrassaysforthedetectionofmalariaparasitesfromhemolyticbloodsamplesshortcommunication AT frickmannhagen comparisonoftworealtimepcrassaysforthedetectionofmalariaparasitesfromhemolyticbloodsamplesshortcommunication |