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Discovery of Selective Small-Molecule Activators of a Bacterial Glycoside Hydrolase**

Fragment-based approaches are used routinely to discover enzyme inhibitors as cellular tools and potential therapeutic agents. There have been few reports, however, of the discovery of small-molecule enzyme activators. Herein, we describe the discovery and characterization of small-molecule activato...

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Autores principales: Darby, John F, Landström, Jens, Roth, Christian, He, Yuan, Davies, Gideon J, Hubbard, Roderick E
Formato: Online Artículo Texto
Lenguaje:English
Publicado: WILEY-VCH Verlag 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4501319/
https://www.ncbi.nlm.nih.gov/pubmed/25291993
http://dx.doi.org/10.1002/anie.201407081
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author Darby, John F
Landström, Jens
Roth, Christian
He, Yuan
Davies, Gideon J
Hubbard, Roderick E
author_facet Darby, John F
Landström, Jens
Roth, Christian
He, Yuan
Davies, Gideon J
Hubbard, Roderick E
author_sort Darby, John F
collection PubMed
description Fragment-based approaches are used routinely to discover enzyme inhibitors as cellular tools and potential therapeutic agents. There have been few reports, however, of the discovery of small-molecule enzyme activators. Herein, we describe the discovery and characterization of small-molecule activators of a glycoside hydrolase (a bacterial O-GlcNAc hydrolase). A ligand-observed NMR screen of a library of commercially available fragments identified an enzyme activator which yielded an approximate 90 % increase in k(cat)/K(M) values (k(cat)=catalytic rate constant; K(M)=Michaelis constant). This compound binds to the enzyme in close proximity to the catalytic center. Evolution of the initial hits led to improved compounds that behave as nonessential activators effecting both K(M) and V(max) values (V(max)=maximum rate of reaction). The compounds appear to stabilize an active “closed” form of the enzyme. Such activators could offer an orthogonal alternative to enzyme inhibitors for perturbation of enzyme activity in vivo, and could also be used for glycoside hydrolase activation in many industrial processes.
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spelling pubmed-45013192015-07-21 Discovery of Selective Small-Molecule Activators of a Bacterial Glycoside Hydrolase** Darby, John F Landström, Jens Roth, Christian He, Yuan Davies, Gideon J Hubbard, Roderick E Angew Chem Int Ed Engl Communications Fragment-based approaches are used routinely to discover enzyme inhibitors as cellular tools and potential therapeutic agents. There have been few reports, however, of the discovery of small-molecule enzyme activators. Herein, we describe the discovery and characterization of small-molecule activators of a glycoside hydrolase (a bacterial O-GlcNAc hydrolase). A ligand-observed NMR screen of a library of commercially available fragments identified an enzyme activator which yielded an approximate 90 % increase in k(cat)/K(M) values (k(cat)=catalytic rate constant; K(M)=Michaelis constant). This compound binds to the enzyme in close proximity to the catalytic center. Evolution of the initial hits led to improved compounds that behave as nonessential activators effecting both K(M) and V(max) values (V(max)=maximum rate of reaction). The compounds appear to stabilize an active “closed” form of the enzyme. Such activators could offer an orthogonal alternative to enzyme inhibitors for perturbation of enzyme activity in vivo, and could also be used for glycoside hydrolase activation in many industrial processes. WILEY-VCH Verlag 2014-12-01 2014-10-07 /pmc/articles/PMC4501319/ /pubmed/25291993 http://dx.doi.org/10.1002/anie.201407081 Text en © 2014 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Communications
Darby, John F
Landström, Jens
Roth, Christian
He, Yuan
Davies, Gideon J
Hubbard, Roderick E
Discovery of Selective Small-Molecule Activators of a Bacterial Glycoside Hydrolase**
title Discovery of Selective Small-Molecule Activators of a Bacterial Glycoside Hydrolase**
title_full Discovery of Selective Small-Molecule Activators of a Bacterial Glycoside Hydrolase**
title_fullStr Discovery of Selective Small-Molecule Activators of a Bacterial Glycoside Hydrolase**
title_full_unstemmed Discovery of Selective Small-Molecule Activators of a Bacterial Glycoside Hydrolase**
title_short Discovery of Selective Small-Molecule Activators of a Bacterial Glycoside Hydrolase**
title_sort discovery of selective small-molecule activators of a bacterial glycoside hydrolase**
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4501319/
https://www.ncbi.nlm.nih.gov/pubmed/25291993
http://dx.doi.org/10.1002/anie.201407081
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