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Modeling Inhibitory Interneurons in Efficient Sensory Coding Models
There is still much unknown regarding the computational role of inhibitory cells in the sensory cortex. While modeling studies could potentially shed light on the critical role played by inhibition in cortical computation, there is a gap between the simplicity of many models of sensory coding and th...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4501572/ https://www.ncbi.nlm.nih.gov/pubmed/26172289 http://dx.doi.org/10.1371/journal.pcbi.1004353 |
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author | Zhu, Mengchen Rozell, Christopher J. |
author_facet | Zhu, Mengchen Rozell, Christopher J. |
author_sort | Zhu, Mengchen |
collection | PubMed |
description | There is still much unknown regarding the computational role of inhibitory cells in the sensory cortex. While modeling studies could potentially shed light on the critical role played by inhibition in cortical computation, there is a gap between the simplicity of many models of sensory coding and the biological complexity of the inhibitory subpopulation. In particular, many models do not respect that inhibition must be implemented in a separate subpopulation, with those inhibitory interneurons having a diversity of tuning properties and characteristic E/I cell ratios. In this study we demonstrate a computational framework for implementing inhibition in dynamical systems models that better respects these biophysical observations about inhibitory interneurons. The main approach leverages recent work related to decomposing matrices into low-rank and sparse components via convex optimization, and explicitly exploits the fact that models and input statistics often have low-dimensional structure that can be exploited for efficient implementations. While this approach is applicable to a wide range of sensory coding models (including a family of models based on Bayesian inference in a linear generative model), for concreteness we demonstrate the approach on a network implementing sparse coding. We show that the resulting implementation stays faithful to the original coding goals while using inhibitory interneurons that are much more biophysically plausible. |
format | Online Article Text |
id | pubmed-4501572 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-45015722015-07-17 Modeling Inhibitory Interneurons in Efficient Sensory Coding Models Zhu, Mengchen Rozell, Christopher J. PLoS Comput Biol Research Article There is still much unknown regarding the computational role of inhibitory cells in the sensory cortex. While modeling studies could potentially shed light on the critical role played by inhibition in cortical computation, there is a gap between the simplicity of many models of sensory coding and the biological complexity of the inhibitory subpopulation. In particular, many models do not respect that inhibition must be implemented in a separate subpopulation, with those inhibitory interneurons having a diversity of tuning properties and characteristic E/I cell ratios. In this study we demonstrate a computational framework for implementing inhibition in dynamical systems models that better respects these biophysical observations about inhibitory interneurons. The main approach leverages recent work related to decomposing matrices into low-rank and sparse components via convex optimization, and explicitly exploits the fact that models and input statistics often have low-dimensional structure that can be exploited for efficient implementations. While this approach is applicable to a wide range of sensory coding models (including a family of models based on Bayesian inference in a linear generative model), for concreteness we demonstrate the approach on a network implementing sparse coding. We show that the resulting implementation stays faithful to the original coding goals while using inhibitory interneurons that are much more biophysically plausible. Public Library of Science 2015-07-14 /pmc/articles/PMC4501572/ /pubmed/26172289 http://dx.doi.org/10.1371/journal.pcbi.1004353 Text en © 2015 Zhu, Rozell http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Zhu, Mengchen Rozell, Christopher J. Modeling Inhibitory Interneurons in Efficient Sensory Coding Models |
title | Modeling Inhibitory Interneurons in Efficient Sensory Coding Models |
title_full | Modeling Inhibitory Interneurons in Efficient Sensory Coding Models |
title_fullStr | Modeling Inhibitory Interneurons in Efficient Sensory Coding Models |
title_full_unstemmed | Modeling Inhibitory Interneurons in Efficient Sensory Coding Models |
title_short | Modeling Inhibitory Interneurons in Efficient Sensory Coding Models |
title_sort | modeling inhibitory interneurons in efficient sensory coding models |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4501572/ https://www.ncbi.nlm.nih.gov/pubmed/26172289 http://dx.doi.org/10.1371/journal.pcbi.1004353 |
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