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Dimensionless, Scale Invariant, Edge Weight Metric for the Study of Complex Structural Networks

High spatial and angular resolution diffusion weighted imaging (DWI) with network analysis provides a unique framework for the study of brain structure in vivo. DWI-derived brain connectivity patterns are best characterized with graph theory using an edge weight to quantify the strength of white mat...

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Autores principales: Colon-Perez, Luis M., Spindler, Caitlin, Goicochea, Shelby, Triplett, William, Parekh, Mansi, Montie, Eric, Carney, Paul R., Price, Catherine, Mareci, Thomas H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4501757/
https://www.ncbi.nlm.nih.gov/pubmed/26173147
http://dx.doi.org/10.1371/journal.pone.0131493
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author Colon-Perez, Luis M.
Spindler, Caitlin
Goicochea, Shelby
Triplett, William
Parekh, Mansi
Montie, Eric
Carney, Paul R.
Price, Catherine
Mareci, Thomas H.
author_facet Colon-Perez, Luis M.
Spindler, Caitlin
Goicochea, Shelby
Triplett, William
Parekh, Mansi
Montie, Eric
Carney, Paul R.
Price, Catherine
Mareci, Thomas H.
author_sort Colon-Perez, Luis M.
collection PubMed
description High spatial and angular resolution diffusion weighted imaging (DWI) with network analysis provides a unique framework for the study of brain structure in vivo. DWI-derived brain connectivity patterns are best characterized with graph theory using an edge weight to quantify the strength of white matter connections between gray matter nodes. Here a dimensionless, scale-invariant edge weight is introduced to measure node connectivity. This edge weight metric provides reasonable and consistent values over any size scale (e.g. rodents to humans) used to quantify the strength of connection. Firstly, simulations were used to assess the effects of tractography seed point density and random errors in the estimated fiber orientations; with sufficient signal-to-noise ratio (SNR), edge weight estimates improve as the seed density increases. Secondly to evaluate the application of the edge weight in the human brain, ten repeated measures of DWI in the same healthy human subject were analyzed. Mean edge weight values within the cingulum and corpus callosum were consistent and showed low variability. Thirdly, using excised rat brains to study the effects of spatial resolution, the weight of edges connecting major structures in the temporal lobe were used to characterize connectivity in this local network. The results indicate that with adequate resolution and SNR, connections between network nodes are characterized well by this edge weight metric. Therefore this new dimensionless, scale-invariant edge weight metric provides a robust measure of network connectivity that can be applied in any size regime.
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spelling pubmed-45017572015-07-17 Dimensionless, Scale Invariant, Edge Weight Metric for the Study of Complex Structural Networks Colon-Perez, Luis M. Spindler, Caitlin Goicochea, Shelby Triplett, William Parekh, Mansi Montie, Eric Carney, Paul R. Price, Catherine Mareci, Thomas H. PLoS One Research Article High spatial and angular resolution diffusion weighted imaging (DWI) with network analysis provides a unique framework for the study of brain structure in vivo. DWI-derived brain connectivity patterns are best characterized with graph theory using an edge weight to quantify the strength of white matter connections between gray matter nodes. Here a dimensionless, scale-invariant edge weight is introduced to measure node connectivity. This edge weight metric provides reasonable and consistent values over any size scale (e.g. rodents to humans) used to quantify the strength of connection. Firstly, simulations were used to assess the effects of tractography seed point density and random errors in the estimated fiber orientations; with sufficient signal-to-noise ratio (SNR), edge weight estimates improve as the seed density increases. Secondly to evaluate the application of the edge weight in the human brain, ten repeated measures of DWI in the same healthy human subject were analyzed. Mean edge weight values within the cingulum and corpus callosum were consistent and showed low variability. Thirdly, using excised rat brains to study the effects of spatial resolution, the weight of edges connecting major structures in the temporal lobe were used to characterize connectivity in this local network. The results indicate that with adequate resolution and SNR, connections between network nodes are characterized well by this edge weight metric. Therefore this new dimensionless, scale-invariant edge weight metric provides a robust measure of network connectivity that can be applied in any size regime. Public Library of Science 2015-07-14 /pmc/articles/PMC4501757/ /pubmed/26173147 http://dx.doi.org/10.1371/journal.pone.0131493 Text en © 2015 Colon-Perez et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Colon-Perez, Luis M.
Spindler, Caitlin
Goicochea, Shelby
Triplett, William
Parekh, Mansi
Montie, Eric
Carney, Paul R.
Price, Catherine
Mareci, Thomas H.
Dimensionless, Scale Invariant, Edge Weight Metric for the Study of Complex Structural Networks
title Dimensionless, Scale Invariant, Edge Weight Metric for the Study of Complex Structural Networks
title_full Dimensionless, Scale Invariant, Edge Weight Metric for the Study of Complex Structural Networks
title_fullStr Dimensionless, Scale Invariant, Edge Weight Metric for the Study of Complex Structural Networks
title_full_unstemmed Dimensionless, Scale Invariant, Edge Weight Metric for the Study of Complex Structural Networks
title_short Dimensionless, Scale Invariant, Edge Weight Metric for the Study of Complex Structural Networks
title_sort dimensionless, scale invariant, edge weight metric for the study of complex structural networks
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4501757/
https://www.ncbi.nlm.nih.gov/pubmed/26173147
http://dx.doi.org/10.1371/journal.pone.0131493
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