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Microarray Analysis Reveals Potential Biological Functions of Histone H2B Monoubiquitination

Histone H2B monoubiquitination is a key histone modification that has significant effects on chromatin higher-order structure and gene transcription. Multiple biological processes have been suggested to be tightly related to the dynamics of H2B monoubiquitination. However, a comprehensive understand...

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Detalles Bibliográficos
Autores principales: Wu, You, Chen, Ping, Jing, Yuanya, Wang, Chen, Men, Yu-Long, Zhan, Wang, Wang, Qiang, Gan, Zhixue, Huang, Jin, Xie, Kun, Mi, Jiangsheng, Yu, Chenghua, Yu, Xiuqing, Chen, Pei-Chao, Chang, Jian-Feng, Cai, Fengfeng, Chen, Su
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4503354/
https://www.ncbi.nlm.nih.gov/pubmed/26177367
http://dx.doi.org/10.1371/journal.pone.0133444
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author Wu, You
Chen, Ping
Jing, Yuanya
Wang, Chen
Men, Yu-Long
Zhan, Wang
Wang, Qiang
Gan, Zhixue
Huang, Jin
Xie, Kun
Mi, Jiangsheng
Yu, Chenghua
Yu, Xiuqing
Chen, Pei-Chao
Chang, Jian-Feng
Cai, Fengfeng
Chen, Su
author_facet Wu, You
Chen, Ping
Jing, Yuanya
Wang, Chen
Men, Yu-Long
Zhan, Wang
Wang, Qiang
Gan, Zhixue
Huang, Jin
Xie, Kun
Mi, Jiangsheng
Yu, Chenghua
Yu, Xiuqing
Chen, Pei-Chao
Chang, Jian-Feng
Cai, Fengfeng
Chen, Su
author_sort Wu, You
collection PubMed
description Histone H2B monoubiquitination is a key histone modification that has significant effects on chromatin higher-order structure and gene transcription. Multiple biological processes have been suggested to be tightly related to the dynamics of H2B monoubiquitination. However, a comprehensive understanding of biological roles of H2B monoubiquitination is still poorly understood. In the present study, we developed an efficient tool to disrupt endogenous H2B monoubiquitination levels by using an H2BK120R mutant construct expressed in human cells. Genome-wide microarray analysis of these cells revealed a potential global view of biological functions of H2B monoubiquitination. Bioinformatics analysis of our data demonstrated that while H2B monoubiquitination expectedly affected a number of previously reported biological pathways, we also uncovered the influence of this histone modification on many novel biological processes. Therefore, our work provided valuable information for understanding the role of H2B monoubiquitination and indicated potential directions for its further studies.
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spelling pubmed-45033542015-07-17 Microarray Analysis Reveals Potential Biological Functions of Histone H2B Monoubiquitination Wu, You Chen, Ping Jing, Yuanya Wang, Chen Men, Yu-Long Zhan, Wang Wang, Qiang Gan, Zhixue Huang, Jin Xie, Kun Mi, Jiangsheng Yu, Chenghua Yu, Xiuqing Chen, Pei-Chao Chang, Jian-Feng Cai, Fengfeng Chen, Su PLoS One Research Article Histone H2B monoubiquitination is a key histone modification that has significant effects on chromatin higher-order structure and gene transcription. Multiple biological processes have been suggested to be tightly related to the dynamics of H2B monoubiquitination. However, a comprehensive understanding of biological roles of H2B monoubiquitination is still poorly understood. In the present study, we developed an efficient tool to disrupt endogenous H2B monoubiquitination levels by using an H2BK120R mutant construct expressed in human cells. Genome-wide microarray analysis of these cells revealed a potential global view of biological functions of H2B monoubiquitination. Bioinformatics analysis of our data demonstrated that while H2B monoubiquitination expectedly affected a number of previously reported biological pathways, we also uncovered the influence of this histone modification on many novel biological processes. Therefore, our work provided valuable information for understanding the role of H2B monoubiquitination and indicated potential directions for its further studies. Public Library of Science 2015-07-15 /pmc/articles/PMC4503354/ /pubmed/26177367 http://dx.doi.org/10.1371/journal.pone.0133444 Text en © 2015 Wu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Wu, You
Chen, Ping
Jing, Yuanya
Wang, Chen
Men, Yu-Long
Zhan, Wang
Wang, Qiang
Gan, Zhixue
Huang, Jin
Xie, Kun
Mi, Jiangsheng
Yu, Chenghua
Yu, Xiuqing
Chen, Pei-Chao
Chang, Jian-Feng
Cai, Fengfeng
Chen, Su
Microarray Analysis Reveals Potential Biological Functions of Histone H2B Monoubiquitination
title Microarray Analysis Reveals Potential Biological Functions of Histone H2B Monoubiquitination
title_full Microarray Analysis Reveals Potential Biological Functions of Histone H2B Monoubiquitination
title_fullStr Microarray Analysis Reveals Potential Biological Functions of Histone H2B Monoubiquitination
title_full_unstemmed Microarray Analysis Reveals Potential Biological Functions of Histone H2B Monoubiquitination
title_short Microarray Analysis Reveals Potential Biological Functions of Histone H2B Monoubiquitination
title_sort microarray analysis reveals potential biological functions of histone h2b monoubiquitination
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4503354/
https://www.ncbi.nlm.nih.gov/pubmed/26177367
http://dx.doi.org/10.1371/journal.pone.0133444
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