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Visualizing Risk Prediction Models
OBJECTIVE: Risk prediction models can assist clinicians in making decisions. To boost the uptake of these models in clinical practice, it is important that end-users understand how the model works and can efficiently communicate its results. We introduce novel methods for interpretable model visuali...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4503430/ https://www.ncbi.nlm.nih.gov/pubmed/26176945 http://dx.doi.org/10.1371/journal.pone.0132614 |
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author | Van Belle, Vanya Van Calster, Ben |
author_facet | Van Belle, Vanya Van Calster, Ben |
author_sort | Van Belle, Vanya |
collection | PubMed |
description | OBJECTIVE: Risk prediction models can assist clinicians in making decisions. To boost the uptake of these models in clinical practice, it is important that end-users understand how the model works and can efficiently communicate its results. We introduce novel methods for interpretable model visualization. METHODS: The proposed visualization techniques are applied to two prediction models from the Framingham Heart Study for the prediction of intermittent claudication and stroke after atrial fibrillation. We represent models using color bars, and visualize the risk estimation process for a specific patient using patient-specific contribution charts. RESULTS: The color-based model representations provide users with an attractive tool to instantly gauge the relative importance of the predictors. The patient-specific representations allow users to understand the relative contribution of each predictor to the patient’s estimated risk, potentially providing insightful information on which to base further patient management. Extensions towards non-linear models and interactions are illustrated on an artificial dataset. CONCLUSION: The proposed methods summarize risk prediction models and risk predictions for specific patients in an alternative way. These representations may facilitate communication between clinicians and patients. |
format | Online Article Text |
id | pubmed-4503430 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-45034302015-07-17 Visualizing Risk Prediction Models Van Belle, Vanya Van Calster, Ben PLoS One Research Article OBJECTIVE: Risk prediction models can assist clinicians in making decisions. To boost the uptake of these models in clinical practice, it is important that end-users understand how the model works and can efficiently communicate its results. We introduce novel methods for interpretable model visualization. METHODS: The proposed visualization techniques are applied to two prediction models from the Framingham Heart Study for the prediction of intermittent claudication and stroke after atrial fibrillation. We represent models using color bars, and visualize the risk estimation process for a specific patient using patient-specific contribution charts. RESULTS: The color-based model representations provide users with an attractive tool to instantly gauge the relative importance of the predictors. The patient-specific representations allow users to understand the relative contribution of each predictor to the patient’s estimated risk, potentially providing insightful information on which to base further patient management. Extensions towards non-linear models and interactions are illustrated on an artificial dataset. CONCLUSION: The proposed methods summarize risk prediction models and risk predictions for specific patients in an alternative way. These representations may facilitate communication between clinicians and patients. Public Library of Science 2015-07-15 /pmc/articles/PMC4503430/ /pubmed/26176945 http://dx.doi.org/10.1371/journal.pone.0132614 Text en © 2015 Van Belle, Van Calster http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Van Belle, Vanya Van Calster, Ben Visualizing Risk Prediction Models |
title | Visualizing Risk Prediction Models |
title_full | Visualizing Risk Prediction Models |
title_fullStr | Visualizing Risk Prediction Models |
title_full_unstemmed | Visualizing Risk Prediction Models |
title_short | Visualizing Risk Prediction Models |
title_sort | visualizing risk prediction models |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4503430/ https://www.ncbi.nlm.nih.gov/pubmed/26176945 http://dx.doi.org/10.1371/journal.pone.0132614 |
work_keys_str_mv | AT vanbellevanya visualizingriskpredictionmodels AT vancalsterben visualizingriskpredictionmodels |