Cargando…
Ebolavirus is evolving but not changing: No evidence for functional change in EBOV from 1976 to the 2014 outbreak
The 2014 epidemic of Ebola virus disease (EVD) has had a devastating impact in West Africa. Sequencing of ebolavirus (EBOV) from infected individuals has revealed extensive genetic variation, leading to speculation that the virus may be adapting to humans, accounting for the scale of the 2014 outbre...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Academic Press
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4503884/ https://www.ncbi.nlm.nih.gov/pubmed/25880111 http://dx.doi.org/10.1016/j.virol.2015.03.029 |
_version_ | 1782381384393818112 |
---|---|
author | Olabode, Abayomi S. Jiang, Xiaowei Robertson, David L. Lovell, Simon C. |
author_facet | Olabode, Abayomi S. Jiang, Xiaowei Robertson, David L. Lovell, Simon C. |
author_sort | Olabode, Abayomi S. |
collection | PubMed |
description | The 2014 epidemic of Ebola virus disease (EVD) has had a devastating impact in West Africa. Sequencing of ebolavirus (EBOV) from infected individuals has revealed extensive genetic variation, leading to speculation that the virus may be adapting to humans, accounting for the scale of the 2014 outbreak. We computationally analyze the variation associated with all EVD outbreaks, and find none of the amino acid replacements lead to identifiable functional changes. These changes have minimal effect on protein structure, being neither stabilizing nor destabilizing, are not found in regions of the proteins associated with known functions and tend to cluster in poorly constrained regions of proteins, specifically intrinsically disordered regions. We find no evidence that the difference between the current and previous outbreaks is due to evolutionary changes associated with transmission to humans. Instead, epidemiological factors are likely to be responsible for the unprecedented spread of EVD. |
format | Online Article Text |
id | pubmed-4503884 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Academic Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-45038842015-08-01 Ebolavirus is evolving but not changing: No evidence for functional change in EBOV from 1976 to the 2014 outbreak Olabode, Abayomi S. Jiang, Xiaowei Robertson, David L. Lovell, Simon C. Virology Article The 2014 epidemic of Ebola virus disease (EVD) has had a devastating impact in West Africa. Sequencing of ebolavirus (EBOV) from infected individuals has revealed extensive genetic variation, leading to speculation that the virus may be adapting to humans, accounting for the scale of the 2014 outbreak. We computationally analyze the variation associated with all EVD outbreaks, and find none of the amino acid replacements lead to identifiable functional changes. These changes have minimal effect on protein structure, being neither stabilizing nor destabilizing, are not found in regions of the proteins associated with known functions and tend to cluster in poorly constrained regions of proteins, specifically intrinsically disordered regions. We find no evidence that the difference between the current and previous outbreaks is due to evolutionary changes associated with transmission to humans. Instead, epidemiological factors are likely to be responsible for the unprecedented spread of EVD. Academic Press 2015-08 /pmc/articles/PMC4503884/ /pubmed/25880111 http://dx.doi.org/10.1016/j.virol.2015.03.029 Text en Crown Copyright © 2015 Published by Elsevier Inc. All rights reserved. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Olabode, Abayomi S. Jiang, Xiaowei Robertson, David L. Lovell, Simon C. Ebolavirus is evolving but not changing: No evidence for functional change in EBOV from 1976 to the 2014 outbreak |
title | Ebolavirus is evolving but not changing: No evidence for functional change in EBOV from 1976 to the 2014 outbreak |
title_full | Ebolavirus is evolving but not changing: No evidence for functional change in EBOV from 1976 to the 2014 outbreak |
title_fullStr | Ebolavirus is evolving but not changing: No evidence for functional change in EBOV from 1976 to the 2014 outbreak |
title_full_unstemmed | Ebolavirus is evolving but not changing: No evidence for functional change in EBOV from 1976 to the 2014 outbreak |
title_short | Ebolavirus is evolving but not changing: No evidence for functional change in EBOV from 1976 to the 2014 outbreak |
title_sort | ebolavirus is evolving but not changing: no evidence for functional change in ebov from 1976 to the 2014 outbreak |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4503884/ https://www.ncbi.nlm.nih.gov/pubmed/25880111 http://dx.doi.org/10.1016/j.virol.2015.03.029 |
work_keys_str_mv | AT olabodeabayomis ebolavirusisevolvingbutnotchangingnoevidenceforfunctionalchangeinebovfrom1976tothe2014outbreak AT jiangxiaowei ebolavirusisevolvingbutnotchangingnoevidenceforfunctionalchangeinebovfrom1976tothe2014outbreak AT robertsondavidl ebolavirusisevolvingbutnotchangingnoevidenceforfunctionalchangeinebovfrom1976tothe2014outbreak AT lovellsimonc ebolavirusisevolvingbutnotchangingnoevidenceforfunctionalchangeinebovfrom1976tothe2014outbreak |