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CDH13 and HCRTR2 May Be Associated with Hypersomnia Symptom of Bipolar Depression: A Genome-Wide Functional Enrichment Pathway Analysis

Although bipolar disorder is highly heritable, the identification of specific genetic variations is limited because of the complex traits underlying the disorder. We performed a genome-wide association study of bipolar disorder using a subphenotype that shows hypersomnia symptom during a major depre...

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Autores principales: Cho, Chul-Hyun, Lee, Heon-Jeong, Woo, Hyun Goo, Choi, Ji-Hye, Greenwood, Tiffany A., Kelsoe, John R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Neuropsychiatric Association 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4504925/
https://www.ncbi.nlm.nih.gov/pubmed/26207136
http://dx.doi.org/10.4306/pi.2015.12.3.402
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author Cho, Chul-Hyun
Lee, Heon-Jeong
Woo, Hyun Goo
Choi, Ji-Hye
Greenwood, Tiffany A.
Kelsoe, John R.
author_facet Cho, Chul-Hyun
Lee, Heon-Jeong
Woo, Hyun Goo
Choi, Ji-Hye
Greenwood, Tiffany A.
Kelsoe, John R.
author_sort Cho, Chul-Hyun
collection PubMed
description Although bipolar disorder is highly heritable, the identification of specific genetic variations is limited because of the complex traits underlying the disorder. We performed a genome-wide association study of bipolar disorder using a subphenotype that shows hypersomnia symptom during a major depressive episode. We investigated a total of 2,191 cases, 1,434 controls, and 703,012 single nucleotide polymorphisms (SNPs) in the merged samples obtained from the Translational Genomics Institute and the Genetic Association Information Network. The gene emerging as the most significant by statistical analysis was rs1553441 (odds ratio=0.4093; p=1.20×10(-5); Permuted p=6.0×10(-6)). However, the 5×0(-8) threshold for statistical significance required in a genome-wide association study was not achieved. The functional enrichment pathway analysis showed significant enrichments in the adhesion, development-related, synaptic transmission-related, and cell recognition-related pathways. For further evaluation, each gene of the enriched pathways was reviewed and matched with genes that were suggested to be associated with psychiatric disorders by previous genetic studies. We found that the cadherin 13 and hypocretin (orexin) receptor 2 genes may be involved in the hypersomnia symptom during a major depressive episode of bipolar disorder.
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spelling pubmed-45049252015-07-23 CDH13 and HCRTR2 May Be Associated with Hypersomnia Symptom of Bipolar Depression: A Genome-Wide Functional Enrichment Pathway Analysis Cho, Chul-Hyun Lee, Heon-Jeong Woo, Hyun Goo Choi, Ji-Hye Greenwood, Tiffany A. Kelsoe, John R. Psychiatry Investig Brief Report Although bipolar disorder is highly heritable, the identification of specific genetic variations is limited because of the complex traits underlying the disorder. We performed a genome-wide association study of bipolar disorder using a subphenotype that shows hypersomnia symptom during a major depressive episode. We investigated a total of 2,191 cases, 1,434 controls, and 703,012 single nucleotide polymorphisms (SNPs) in the merged samples obtained from the Translational Genomics Institute and the Genetic Association Information Network. The gene emerging as the most significant by statistical analysis was rs1553441 (odds ratio=0.4093; p=1.20×10(-5); Permuted p=6.0×10(-6)). However, the 5×0(-8) threshold for statistical significance required in a genome-wide association study was not achieved. The functional enrichment pathway analysis showed significant enrichments in the adhesion, development-related, synaptic transmission-related, and cell recognition-related pathways. For further evaluation, each gene of the enriched pathways was reviewed and matched with genes that were suggested to be associated with psychiatric disorders by previous genetic studies. We found that the cadherin 13 and hypocretin (orexin) receptor 2 genes may be involved in the hypersomnia symptom during a major depressive episode of bipolar disorder. Korean Neuropsychiatric Association 2015-07 2015-07-06 /pmc/articles/PMC4504925/ /pubmed/26207136 http://dx.doi.org/10.4306/pi.2015.12.3.402 Text en Copyright © 2015 Korean Neuropsychiatric Association http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Brief Report
Cho, Chul-Hyun
Lee, Heon-Jeong
Woo, Hyun Goo
Choi, Ji-Hye
Greenwood, Tiffany A.
Kelsoe, John R.
CDH13 and HCRTR2 May Be Associated with Hypersomnia Symptom of Bipolar Depression: A Genome-Wide Functional Enrichment Pathway Analysis
title CDH13 and HCRTR2 May Be Associated with Hypersomnia Symptom of Bipolar Depression: A Genome-Wide Functional Enrichment Pathway Analysis
title_full CDH13 and HCRTR2 May Be Associated with Hypersomnia Symptom of Bipolar Depression: A Genome-Wide Functional Enrichment Pathway Analysis
title_fullStr CDH13 and HCRTR2 May Be Associated with Hypersomnia Symptom of Bipolar Depression: A Genome-Wide Functional Enrichment Pathway Analysis
title_full_unstemmed CDH13 and HCRTR2 May Be Associated with Hypersomnia Symptom of Bipolar Depression: A Genome-Wide Functional Enrichment Pathway Analysis
title_short CDH13 and HCRTR2 May Be Associated with Hypersomnia Symptom of Bipolar Depression: A Genome-Wide Functional Enrichment Pathway Analysis
title_sort cdh13 and hcrtr2 may be associated with hypersomnia symptom of bipolar depression: a genome-wide functional enrichment pathway analysis
topic Brief Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4504925/
https://www.ncbi.nlm.nih.gov/pubmed/26207136
http://dx.doi.org/10.4306/pi.2015.12.3.402
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