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Using natural language processing techniques to inform research on nanotechnology
Literature in the field of nanotechnology is exponentially increasing with more and more engineered nanomaterials being created, characterized, and tested for performance and safety. With the deluge of published data, there is a need for natural language processing approaches to semi-automate the ca...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Beilstein-Institut
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4505089/ https://www.ncbi.nlm.nih.gov/pubmed/26199848 http://dx.doi.org/10.3762/bjnano.6.149 |
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author | Lewinski, Nastassja A McInnes, Bridget T |
author_facet | Lewinski, Nastassja A McInnes, Bridget T |
author_sort | Lewinski, Nastassja A |
collection | PubMed |
description | Literature in the field of nanotechnology is exponentially increasing with more and more engineered nanomaterials being created, characterized, and tested for performance and safety. With the deluge of published data, there is a need for natural language processing approaches to semi-automate the cataloguing of engineered nanomaterials and their associated physico-chemical properties, performance, exposure scenarios, and biological effects. In this paper, we review the different informatics methods that have been applied to patent mining, nanomaterial/device characterization, nanomedicine, and environmental risk assessment. Nine natural language processing (NLP)-based tools were identified: NanoPort, NanoMapper, TechPerceptor, a Text Mining Framework, a Nanodevice Analyzer, a Clinical Trial Document Classifier, Nanotoxicity Searcher, NanoSifter, and NEIMiner. We conclude with recommendations for sharing NLP-related tools through online repositories to broaden participation in nanoinformatics. |
format | Online Article Text |
id | pubmed-4505089 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Beilstein-Institut |
record_format | MEDLINE/PubMed |
spelling | pubmed-45050892015-07-21 Using natural language processing techniques to inform research on nanotechnology Lewinski, Nastassja A McInnes, Bridget T Beilstein J Nanotechnol Review Literature in the field of nanotechnology is exponentially increasing with more and more engineered nanomaterials being created, characterized, and tested for performance and safety. With the deluge of published data, there is a need for natural language processing approaches to semi-automate the cataloguing of engineered nanomaterials and their associated physico-chemical properties, performance, exposure scenarios, and biological effects. In this paper, we review the different informatics methods that have been applied to patent mining, nanomaterial/device characterization, nanomedicine, and environmental risk assessment. Nine natural language processing (NLP)-based tools were identified: NanoPort, NanoMapper, TechPerceptor, a Text Mining Framework, a Nanodevice Analyzer, a Clinical Trial Document Classifier, Nanotoxicity Searcher, NanoSifter, and NEIMiner. We conclude with recommendations for sharing NLP-related tools through online repositories to broaden participation in nanoinformatics. Beilstein-Institut 2015-07-01 /pmc/articles/PMC4505089/ /pubmed/26199848 http://dx.doi.org/10.3762/bjnano.6.149 Text en Copyright © 2015, Lewinski and McInnes https://creativecommons.org/licenses/by/2.0https://www.beilstein-journals.org/bjnano/termsThis is an Open Access article under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The license is subject to the Beilstein Journal of Nanotechnology terms and conditions: (https://www.beilstein-journals.org/bjnano/terms) |
spellingShingle | Review Lewinski, Nastassja A McInnes, Bridget T Using natural language processing techniques to inform research on nanotechnology |
title | Using natural language processing techniques to inform research on nanotechnology |
title_full | Using natural language processing techniques to inform research on nanotechnology |
title_fullStr | Using natural language processing techniques to inform research on nanotechnology |
title_full_unstemmed | Using natural language processing techniques to inform research on nanotechnology |
title_short | Using natural language processing techniques to inform research on nanotechnology |
title_sort | using natural language processing techniques to inform research on nanotechnology |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4505089/ https://www.ncbi.nlm.nih.gov/pubmed/26199848 http://dx.doi.org/10.3762/bjnano.6.149 |
work_keys_str_mv | AT lewinskinastassjaa usingnaturallanguageprocessingtechniquestoinformresearchonnanotechnology AT mcinnesbridgett usingnaturallanguageprocessingtechniquestoinformresearchonnanotechnology |