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Using natural language processing techniques to inform research on nanotechnology

Literature in the field of nanotechnology is exponentially increasing with more and more engineered nanomaterials being created, characterized, and tested for performance and safety. With the deluge of published data, there is a need for natural language processing approaches to semi-automate the ca...

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Detalles Bibliográficos
Autores principales: Lewinski, Nastassja A, McInnes, Bridget T
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Beilstein-Institut 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4505089/
https://www.ncbi.nlm.nih.gov/pubmed/26199848
http://dx.doi.org/10.3762/bjnano.6.149
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author Lewinski, Nastassja A
McInnes, Bridget T
author_facet Lewinski, Nastassja A
McInnes, Bridget T
author_sort Lewinski, Nastassja A
collection PubMed
description Literature in the field of nanotechnology is exponentially increasing with more and more engineered nanomaterials being created, characterized, and tested for performance and safety. With the deluge of published data, there is a need for natural language processing approaches to semi-automate the cataloguing of engineered nanomaterials and their associated physico-chemical properties, performance, exposure scenarios, and biological effects. In this paper, we review the different informatics methods that have been applied to patent mining, nanomaterial/device characterization, nanomedicine, and environmental risk assessment. Nine natural language processing (NLP)-based tools were identified: NanoPort, NanoMapper, TechPerceptor, a Text Mining Framework, a Nanodevice Analyzer, a Clinical Trial Document Classifier, Nanotoxicity Searcher, NanoSifter, and NEIMiner. We conclude with recommendations for sharing NLP-related tools through online repositories to broaden participation in nanoinformatics.
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spelling pubmed-45050892015-07-21 Using natural language processing techniques to inform research on nanotechnology Lewinski, Nastassja A McInnes, Bridget T Beilstein J Nanotechnol Review Literature in the field of nanotechnology is exponentially increasing with more and more engineered nanomaterials being created, characterized, and tested for performance and safety. With the deluge of published data, there is a need for natural language processing approaches to semi-automate the cataloguing of engineered nanomaterials and their associated physico-chemical properties, performance, exposure scenarios, and biological effects. In this paper, we review the different informatics methods that have been applied to patent mining, nanomaterial/device characterization, nanomedicine, and environmental risk assessment. Nine natural language processing (NLP)-based tools were identified: NanoPort, NanoMapper, TechPerceptor, a Text Mining Framework, a Nanodevice Analyzer, a Clinical Trial Document Classifier, Nanotoxicity Searcher, NanoSifter, and NEIMiner. We conclude with recommendations for sharing NLP-related tools through online repositories to broaden participation in nanoinformatics. Beilstein-Institut 2015-07-01 /pmc/articles/PMC4505089/ /pubmed/26199848 http://dx.doi.org/10.3762/bjnano.6.149 Text en Copyright © 2015, Lewinski and McInnes https://creativecommons.org/licenses/by/2.0https://www.beilstein-journals.org/bjnano/termsThis is an Open Access article under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The license is subject to the Beilstein Journal of Nanotechnology terms and conditions: (https://www.beilstein-journals.org/bjnano/terms)
spellingShingle Review
Lewinski, Nastassja A
McInnes, Bridget T
Using natural language processing techniques to inform research on nanotechnology
title Using natural language processing techniques to inform research on nanotechnology
title_full Using natural language processing techniques to inform research on nanotechnology
title_fullStr Using natural language processing techniques to inform research on nanotechnology
title_full_unstemmed Using natural language processing techniques to inform research on nanotechnology
title_short Using natural language processing techniques to inform research on nanotechnology
title_sort using natural language processing techniques to inform research on nanotechnology
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4505089/
https://www.ncbi.nlm.nih.gov/pubmed/26199848
http://dx.doi.org/10.3762/bjnano.6.149
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