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Dual Binding of an Antibody and a Small Molecule Increases the Stability of TERRA G-Quadruplex**

In investigating the binding interactions between the human telomeric RNA (TERRA) G-quadruplex (GQ) and its ligands, it was found that the small molecule carboxypyridostatin (cPDS) and the GQ-selective antibody BG4 simultaneously bind the TERRA GQ. We previously showed that the overall binding affin...

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Autores principales: Yangyuoru, Philip M, Di Antonio, Marco, Ghimire, Chiran, Biffi, Giulia, Balasubramanian, Shankar, Mao, Hanbin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: WILEY-VCH Verlag 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4506565/
https://www.ncbi.nlm.nih.gov/pubmed/25421962
http://dx.doi.org/10.1002/anie.201408113
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author Yangyuoru, Philip M
Di Antonio, Marco
Ghimire, Chiran
Biffi, Giulia
Balasubramanian, Shankar
Mao, Hanbin
author_facet Yangyuoru, Philip M
Di Antonio, Marco
Ghimire, Chiran
Biffi, Giulia
Balasubramanian, Shankar
Mao, Hanbin
author_sort Yangyuoru, Philip M
collection PubMed
description In investigating the binding interactions between the human telomeric RNA (TERRA) G-quadruplex (GQ) and its ligands, it was found that the small molecule carboxypyridostatin (cPDS) and the GQ-selective antibody BG4 simultaneously bind the TERRA GQ. We previously showed that the overall binding affinity of BG4 for RNA GQs is not significantly affected in the presence of cPDS. However, single-molecule mechanical unfolding experiments revealed a population (48 %) with substantially increased mechanical and thermodynamic stability. Force-jump kinetic investigations suggested competitive binding of cPDS and BG4 to the TERRA GQ. Following this, the two bound ligands slowly rearrange, thereby leading to the minor population with increased stability. Given the relevance of G-quadruplexes in the regulation of biological processes, we anticipate that the unprecedented conformational rearrangement observed in the TERRA-GQ–ligand complex may inspire new strategies for the selective stabilization of G-quadruplexes in cells.
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spelling pubmed-45065652015-07-22 Dual Binding of an Antibody and a Small Molecule Increases the Stability of TERRA G-Quadruplex** Yangyuoru, Philip M Di Antonio, Marco Ghimire, Chiran Biffi, Giulia Balasubramanian, Shankar Mao, Hanbin Angew Chem Int Ed Engl Communications In investigating the binding interactions between the human telomeric RNA (TERRA) G-quadruplex (GQ) and its ligands, it was found that the small molecule carboxypyridostatin (cPDS) and the GQ-selective antibody BG4 simultaneously bind the TERRA GQ. We previously showed that the overall binding affinity of BG4 for RNA GQs is not significantly affected in the presence of cPDS. However, single-molecule mechanical unfolding experiments revealed a population (48 %) with substantially increased mechanical and thermodynamic stability. Force-jump kinetic investigations suggested competitive binding of cPDS and BG4 to the TERRA GQ. Following this, the two bound ligands slowly rearrange, thereby leading to the minor population with increased stability. Given the relevance of G-quadruplexes in the regulation of biological processes, we anticipate that the unprecedented conformational rearrangement observed in the TERRA-GQ–ligand complex may inspire new strategies for the selective stabilization of G-quadruplexes in cells. WILEY-VCH Verlag 2015-01-12 2014-11-24 /pmc/articles/PMC4506565/ /pubmed/25421962 http://dx.doi.org/10.1002/anie.201408113 Text en © 2014 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Communications
Yangyuoru, Philip M
Di Antonio, Marco
Ghimire, Chiran
Biffi, Giulia
Balasubramanian, Shankar
Mao, Hanbin
Dual Binding of an Antibody and a Small Molecule Increases the Stability of TERRA G-Quadruplex**
title Dual Binding of an Antibody and a Small Molecule Increases the Stability of TERRA G-Quadruplex**
title_full Dual Binding of an Antibody and a Small Molecule Increases the Stability of TERRA G-Quadruplex**
title_fullStr Dual Binding of an Antibody and a Small Molecule Increases the Stability of TERRA G-Quadruplex**
title_full_unstemmed Dual Binding of an Antibody and a Small Molecule Increases the Stability of TERRA G-Quadruplex**
title_short Dual Binding of an Antibody and a Small Molecule Increases the Stability of TERRA G-Quadruplex**
title_sort dual binding of an antibody and a small molecule increases the stability of terra g-quadruplex**
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4506565/
https://www.ncbi.nlm.nih.gov/pubmed/25421962
http://dx.doi.org/10.1002/anie.201408113
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