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A Simple Rank Product Approach for Analyzing Two Classes
The rank product statistic has been widely used to detect differentially expressed genes in replicated microarrays and a one-class setting. The objective of this article is to apply a rank product statistic to approximate the P-value of differential expression in a two-class setting, such as in norm...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Libertas Academica
2015
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4507469/ https://www.ncbi.nlm.nih.gov/pubmed/26244016 http://dx.doi.org/10.4137/BBI.S26414 |
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author | Yang, Tae Young |
author_facet | Yang, Tae Young |
author_sort | Yang, Tae Young |
collection | PubMed |
description | The rank product statistic has been widely used to detect differentially expressed genes in replicated microarrays and a one-class setting. The objective of this article is to apply a rank product statistic to approximate the P-value of differential expression in a two-class setting, such as in normal and cancer cells. For this purpose, we introduce a simple statistic that compares the P-values of each class’s rank product statistic. Its null distribution is straightforwardly derived using the change-of-variable technique. |
format | Online Article Text |
id | pubmed-4507469 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Libertas Academica |
record_format | MEDLINE/PubMed |
spelling | pubmed-45074692015-08-04 A Simple Rank Product Approach for Analyzing Two Classes Yang, Tae Young Bioinform Biol Insights Methodology The rank product statistic has been widely used to detect differentially expressed genes in replicated microarrays and a one-class setting. The objective of this article is to apply a rank product statistic to approximate the P-value of differential expression in a two-class setting, such as in normal and cancer cells. For this purpose, we introduce a simple statistic that compares the P-values of each class’s rank product statistic. Its null distribution is straightforwardly derived using the change-of-variable technique. Libertas Academica 2015-07-16 /pmc/articles/PMC4507469/ /pubmed/26244016 http://dx.doi.org/10.4137/BBI.S26414 Text en © 2015 the author(s), publisher and licensee Libertas Academica Ltd. This is an open-access article distributed under the terms of the Creative Commons CC-BY-NC 3.0 License. |
spellingShingle | Methodology Yang, Tae Young A Simple Rank Product Approach for Analyzing Two Classes |
title | A Simple Rank Product Approach for Analyzing Two Classes |
title_full | A Simple Rank Product Approach for Analyzing Two Classes |
title_fullStr | A Simple Rank Product Approach for Analyzing Two Classes |
title_full_unstemmed | A Simple Rank Product Approach for Analyzing Two Classes |
title_short | A Simple Rank Product Approach for Analyzing Two Classes |
title_sort | simple rank product approach for analyzing two classes |
topic | Methodology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4507469/ https://www.ncbi.nlm.nih.gov/pubmed/26244016 http://dx.doi.org/10.4137/BBI.S26414 |
work_keys_str_mv | AT yangtaeyoung asimplerankproductapproachforanalyzingtwoclasses AT yangtaeyoung simplerankproductapproachforanalyzingtwoclasses |