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A Simple Rank Product Approach for Analyzing Two Classes

The rank product statistic has been widely used to detect differentially expressed genes in replicated microarrays and a one-class setting. The objective of this article is to apply a rank product statistic to approximate the P-value of differential expression in a two-class setting, such as in norm...

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Detalles Bibliográficos
Autor principal: Yang, Tae Young
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Libertas Academica 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4507469/
https://www.ncbi.nlm.nih.gov/pubmed/26244016
http://dx.doi.org/10.4137/BBI.S26414
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author Yang, Tae Young
author_facet Yang, Tae Young
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description The rank product statistic has been widely used to detect differentially expressed genes in replicated microarrays and a one-class setting. The objective of this article is to apply a rank product statistic to approximate the P-value of differential expression in a two-class setting, such as in normal and cancer cells. For this purpose, we introduce a simple statistic that compares the P-values of each class’s rank product statistic. Its null distribution is straightforwardly derived using the change-of-variable technique.
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spelling pubmed-45074692015-08-04 A Simple Rank Product Approach for Analyzing Two Classes Yang, Tae Young Bioinform Biol Insights Methodology The rank product statistic has been widely used to detect differentially expressed genes in replicated microarrays and a one-class setting. The objective of this article is to apply a rank product statistic to approximate the P-value of differential expression in a two-class setting, such as in normal and cancer cells. For this purpose, we introduce a simple statistic that compares the P-values of each class’s rank product statistic. Its null distribution is straightforwardly derived using the change-of-variable technique. Libertas Academica 2015-07-16 /pmc/articles/PMC4507469/ /pubmed/26244016 http://dx.doi.org/10.4137/BBI.S26414 Text en © 2015 the author(s), publisher and licensee Libertas Academica Ltd. This is an open-access article distributed under the terms of the Creative Commons CC-BY-NC 3.0 License.
spellingShingle Methodology
Yang, Tae Young
A Simple Rank Product Approach for Analyzing Two Classes
title A Simple Rank Product Approach for Analyzing Two Classes
title_full A Simple Rank Product Approach for Analyzing Two Classes
title_fullStr A Simple Rank Product Approach for Analyzing Two Classes
title_full_unstemmed A Simple Rank Product Approach for Analyzing Two Classes
title_short A Simple Rank Product Approach for Analyzing Two Classes
title_sort simple rank product approach for analyzing two classes
topic Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4507469/
https://www.ncbi.nlm.nih.gov/pubmed/26244016
http://dx.doi.org/10.4137/BBI.S26414
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