Cargando…
Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study
BACKGROUND: In recent years, analyses of event related potentials/fields have moved from the selection of a few components and peaks to a mass-univariate approach in which the whole data space is analyzed. Such extensive testing increases the number of false positives and correction for multiple com...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier/North-Holland Biomedical Press
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4510917/ https://www.ncbi.nlm.nih.gov/pubmed/25128255 http://dx.doi.org/10.1016/j.jneumeth.2014.08.003 |
_version_ | 1782382264095604736 |
---|---|
author | Pernet, C.R. Latinus, M. Nichols, T.E. Rousselet, G.A. |
author_facet | Pernet, C.R. Latinus, M. Nichols, T.E. Rousselet, G.A. |
author_sort | Pernet, C.R. |
collection | PubMed |
description | BACKGROUND: In recent years, analyses of event related potentials/fields have moved from the selection of a few components and peaks to a mass-univariate approach in which the whole data space is analyzed. Such extensive testing increases the number of false positives and correction for multiple comparisons is needed. METHOD: Here we review all cluster-based correction for multiple comparison methods (cluster-height, cluster-size, cluster-mass, and threshold free cluster enhancement – TFCE), in conjunction with two computational approaches (permutation and bootstrap). RESULTS: Data driven Monte-Carlo simulations comparing two conditions within subjects (two sample Student's t-test) showed that, on average, all cluster-based methods using permutation or bootstrap alike control well the family-wise error rate (FWER), with a few caveats. CONCLUSIONS: (i) A minimum of 800 iterations are necessary to obtain stable results; (ii) below 50 trials, bootstrap methods are too conservative; (iii) for low critical family-wise error rates (e.g. p = 1%), permutations can be too liberal; (iv) TFCE controls best the type 1 error rate with an attenuated extent parameter (i.e. power < 1). |
format | Online Article Text |
id | pubmed-4510917 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Elsevier/North-Holland Biomedical Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-45109172015-08-07 Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study Pernet, C.R. Latinus, M. Nichols, T.E. Rousselet, G.A. J Neurosci Methods Computational Neuroscience BACKGROUND: In recent years, analyses of event related potentials/fields have moved from the selection of a few components and peaks to a mass-univariate approach in which the whole data space is analyzed. Such extensive testing increases the number of false positives and correction for multiple comparisons is needed. METHOD: Here we review all cluster-based correction for multiple comparison methods (cluster-height, cluster-size, cluster-mass, and threshold free cluster enhancement – TFCE), in conjunction with two computational approaches (permutation and bootstrap). RESULTS: Data driven Monte-Carlo simulations comparing two conditions within subjects (two sample Student's t-test) showed that, on average, all cluster-based methods using permutation or bootstrap alike control well the family-wise error rate (FWER), with a few caveats. CONCLUSIONS: (i) A minimum of 800 iterations are necessary to obtain stable results; (ii) below 50 trials, bootstrap methods are too conservative; (iii) for low critical family-wise error rates (e.g. p = 1%), permutations can be too liberal; (iv) TFCE controls best the type 1 error rate with an attenuated extent parameter (i.e. power < 1). Elsevier/North-Holland Biomedical Press 2015-07-30 /pmc/articles/PMC4510917/ /pubmed/25128255 http://dx.doi.org/10.1016/j.jneumeth.2014.08.003 Text en Crown Copyright © Published by Elsevier B.V. All rights reserved. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Computational Neuroscience Pernet, C.R. Latinus, M. Nichols, T.E. Rousselet, G.A. Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study |
title | Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study |
title_full | Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study |
title_fullStr | Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study |
title_full_unstemmed | Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study |
title_short | Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study |
title_sort | cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: a simulation study |
topic | Computational Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4510917/ https://www.ncbi.nlm.nih.gov/pubmed/25128255 http://dx.doi.org/10.1016/j.jneumeth.2014.08.003 |
work_keys_str_mv | AT pernetcr clusterbasedcomputationalmethodsformassunivariateanalysesofeventrelatedbrainpotentialsfieldsasimulationstudy AT latinusm clusterbasedcomputationalmethodsformassunivariateanalysesofeventrelatedbrainpotentialsfieldsasimulationstudy AT nicholste clusterbasedcomputationalmethodsformassunivariateanalysesofeventrelatedbrainpotentialsfieldsasimulationstudy AT rousseletga clusterbasedcomputationalmethodsformassunivariateanalysesofeventrelatedbrainpotentialsfieldsasimulationstudy |