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Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study

BACKGROUND: In recent years, analyses of event related potentials/fields have moved from the selection of a few components and peaks to a mass-univariate approach in which the whole data space is analyzed. Such extensive testing increases the number of false positives and correction for multiple com...

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Detalles Bibliográficos
Autores principales: Pernet, C.R., Latinus, M., Nichols, T.E., Rousselet, G.A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier/North-Holland Biomedical Press 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4510917/
https://www.ncbi.nlm.nih.gov/pubmed/25128255
http://dx.doi.org/10.1016/j.jneumeth.2014.08.003
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author Pernet, C.R.
Latinus, M.
Nichols, T.E.
Rousselet, G.A.
author_facet Pernet, C.R.
Latinus, M.
Nichols, T.E.
Rousselet, G.A.
author_sort Pernet, C.R.
collection PubMed
description BACKGROUND: In recent years, analyses of event related potentials/fields have moved from the selection of a few components and peaks to a mass-univariate approach in which the whole data space is analyzed. Such extensive testing increases the number of false positives and correction for multiple comparisons is needed. METHOD: Here we review all cluster-based correction for multiple comparison methods (cluster-height, cluster-size, cluster-mass, and threshold free cluster enhancement – TFCE), in conjunction with two computational approaches (permutation and bootstrap). RESULTS: Data driven Monte-Carlo simulations comparing two conditions within subjects (two sample Student's t-test) showed that, on average, all cluster-based methods using permutation or bootstrap alike control well the family-wise error rate (FWER), with a few caveats. CONCLUSIONS: (i) A minimum of 800 iterations are necessary to obtain stable results; (ii) below 50 trials, bootstrap methods are too conservative; (iii) for low critical family-wise error rates (e.g. p = 1%), permutations can be too liberal; (iv) TFCE controls best the type 1 error rate with an attenuated extent parameter (i.e. power < 1).
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spelling pubmed-45109172015-08-07 Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study Pernet, C.R. Latinus, M. Nichols, T.E. Rousselet, G.A. J Neurosci Methods Computational Neuroscience BACKGROUND: In recent years, analyses of event related potentials/fields have moved from the selection of a few components and peaks to a mass-univariate approach in which the whole data space is analyzed. Such extensive testing increases the number of false positives and correction for multiple comparisons is needed. METHOD: Here we review all cluster-based correction for multiple comparison methods (cluster-height, cluster-size, cluster-mass, and threshold free cluster enhancement – TFCE), in conjunction with two computational approaches (permutation and bootstrap). RESULTS: Data driven Monte-Carlo simulations comparing two conditions within subjects (two sample Student's t-test) showed that, on average, all cluster-based methods using permutation or bootstrap alike control well the family-wise error rate (FWER), with a few caveats. CONCLUSIONS: (i) A minimum of 800 iterations are necessary to obtain stable results; (ii) below 50 trials, bootstrap methods are too conservative; (iii) for low critical family-wise error rates (e.g. p = 1%), permutations can be too liberal; (iv) TFCE controls best the type 1 error rate with an attenuated extent parameter (i.e. power < 1). Elsevier/North-Holland Biomedical Press 2015-07-30 /pmc/articles/PMC4510917/ /pubmed/25128255 http://dx.doi.org/10.1016/j.jneumeth.2014.08.003 Text en Crown Copyright © Published by Elsevier B.V. All rights reserved. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Computational Neuroscience
Pernet, C.R.
Latinus, M.
Nichols, T.E.
Rousselet, G.A.
Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study
title Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study
title_full Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study
title_fullStr Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study
title_full_unstemmed Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study
title_short Cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: A simulation study
title_sort cluster-based computational methods for mass univariate analyses of event-related brain potentials/fields: a simulation study
topic Computational Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4510917/
https://www.ncbi.nlm.nih.gov/pubmed/25128255
http://dx.doi.org/10.1016/j.jneumeth.2014.08.003
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