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Ionic switch controls the DNA state in phage λ

We have recently found that DNA packaged in phage λ undergoes a disordering transition triggered by temperature, which results in increased genome mobility. This solid-to-fluid like DNA transition markedly increases the number of infectious λ particles facilitating infection. However, the structural...

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Autores principales: Li, Dong, Liu, Ting, Zuo, Xiaobing, Li, Tao, Qiu, Xiangyun, Evilevitch, Alex
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4513876/
https://www.ncbi.nlm.nih.gov/pubmed/26092697
http://dx.doi.org/10.1093/nar/gkv611
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author Li, Dong
Liu, Ting
Zuo, Xiaobing
Li, Tao
Qiu, Xiangyun
Evilevitch, Alex
author_facet Li, Dong
Liu, Ting
Zuo, Xiaobing
Li, Tao
Qiu, Xiangyun
Evilevitch, Alex
author_sort Li, Dong
collection PubMed
description We have recently found that DNA packaged in phage λ undergoes a disordering transition triggered by temperature, which results in increased genome mobility. This solid-to-fluid like DNA transition markedly increases the number of infectious λ particles facilitating infection. However, the structural transition strongly depends on temperature and ionic conditions in the surrounding medium. Using titration microcalorimetry combined with solution X-ray scattering, we mapped both energetic and structural changes associated with transition of the encapsidated λ-DNA. Packaged DNA needs to reach a critical stress level in order for transition to occur. We varied the stress on DNA in the capsid by changing the temperature, packaged DNA length and ionic conditions. We found striking evidence that the intracapsid DNA transition is ‘switched on’ at the ionic conditions mimicking those in vivo and also at the physiologic temperature of infection at 37°C. This ion regulated on-off switch of packaged DNA mobility in turn affects viral replication. These results suggest a remarkable adaptation of phage λ to the environment of its host bacteria in the human gut. The metastable DNA state in the capsid provides a new paradigm for the physical evolution of viruses.
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spelling pubmed-45138762015-07-27 Ionic switch controls the DNA state in phage λ Li, Dong Liu, Ting Zuo, Xiaobing Li, Tao Qiu, Xiangyun Evilevitch, Alex Nucleic Acids Res Genome Integrity, Repair and Replication We have recently found that DNA packaged in phage λ undergoes a disordering transition triggered by temperature, which results in increased genome mobility. This solid-to-fluid like DNA transition markedly increases the number of infectious λ particles facilitating infection. However, the structural transition strongly depends on temperature and ionic conditions in the surrounding medium. Using titration microcalorimetry combined with solution X-ray scattering, we mapped both energetic and structural changes associated with transition of the encapsidated λ-DNA. Packaged DNA needs to reach a critical stress level in order for transition to occur. We varied the stress on DNA in the capsid by changing the temperature, packaged DNA length and ionic conditions. We found striking evidence that the intracapsid DNA transition is ‘switched on’ at the ionic conditions mimicking those in vivo and also at the physiologic temperature of infection at 37°C. This ion regulated on-off switch of packaged DNA mobility in turn affects viral replication. These results suggest a remarkable adaptation of phage λ to the environment of its host bacteria in the human gut. The metastable DNA state in the capsid provides a new paradigm for the physical evolution of viruses. Oxford University Press 2015-07-27 2015-06-19 /pmc/articles/PMC4513876/ /pubmed/26092697 http://dx.doi.org/10.1093/nar/gkv611 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Genome Integrity, Repair and Replication
Li, Dong
Liu, Ting
Zuo, Xiaobing
Li, Tao
Qiu, Xiangyun
Evilevitch, Alex
Ionic switch controls the DNA state in phage λ
title Ionic switch controls the DNA state in phage λ
title_full Ionic switch controls the DNA state in phage λ
title_fullStr Ionic switch controls the DNA state in phage λ
title_full_unstemmed Ionic switch controls the DNA state in phage λ
title_short Ionic switch controls the DNA state in phage λ
title_sort ionic switch controls the dna state in phage λ
topic Genome Integrity, Repair and Replication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4513876/
https://www.ncbi.nlm.nih.gov/pubmed/26092697
http://dx.doi.org/10.1093/nar/gkv611
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