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Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley
The Genome-Wide Association Studies approach was used to detect Quantitative Trait Loci associated with tocochromanol concentrations using a panel of 1,466 barley accessions. All major tocochromanol types- α-, β-, δ-, γ-tocopherol and tocotrienol- were assayed. We found 13 single nucleotide polymorp...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4514886/ https://www.ncbi.nlm.nih.gov/pubmed/26208213 http://dx.doi.org/10.1371/journal.pone.0133767 |
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author | Graebner, Ryan C. Wise, Mitchell Cuesta-Marcos, Alfonso Geniza, Matthew Blake, Tom Blake, Victoria C. Butler, Joshua Chao, Shiaomen Hole, David J. Horsley, Rich Jaiswal, Pankaj Obert, Don Smith, Kevin P. Ullrich, Steven Hayes, Patrick M. |
author_facet | Graebner, Ryan C. Wise, Mitchell Cuesta-Marcos, Alfonso Geniza, Matthew Blake, Tom Blake, Victoria C. Butler, Joshua Chao, Shiaomen Hole, David J. Horsley, Rich Jaiswal, Pankaj Obert, Don Smith, Kevin P. Ullrich, Steven Hayes, Patrick M. |
author_sort | Graebner, Ryan C. |
collection | PubMed |
description | The Genome-Wide Association Studies approach was used to detect Quantitative Trait Loci associated with tocochromanol concentrations using a panel of 1,466 barley accessions. All major tocochromanol types- α-, β-, δ-, γ-tocopherol and tocotrienol- were assayed. We found 13 single nucleotide polymorphisms associated with the concentration of one or more of these tocochromanol forms in barley, seven of which were within 2 cM of sequences homologous to cloned genes associated with tocochromanol production in barley and/or other plants. These associations confirmed a prior report based on bi-parental QTL mapping. This knowledge will aid future efforts to better understand the role of tocochromanols in barley, with specific reference to abiotic stress resistance. It will also be useful in developing barley varieties with higher tocochromanol concentrations, although at current recommended daily consumption amounts, barley would not be an effective sole source of vitamin E. However, it could be an important contributor in the context of whole grains in a balanced diet. |
format | Online Article Text |
id | pubmed-4514886 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-45148862015-07-29 Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley Graebner, Ryan C. Wise, Mitchell Cuesta-Marcos, Alfonso Geniza, Matthew Blake, Tom Blake, Victoria C. Butler, Joshua Chao, Shiaomen Hole, David J. Horsley, Rich Jaiswal, Pankaj Obert, Don Smith, Kevin P. Ullrich, Steven Hayes, Patrick M. PLoS One Research Article The Genome-Wide Association Studies approach was used to detect Quantitative Trait Loci associated with tocochromanol concentrations using a panel of 1,466 barley accessions. All major tocochromanol types- α-, β-, δ-, γ-tocopherol and tocotrienol- were assayed. We found 13 single nucleotide polymorphisms associated with the concentration of one or more of these tocochromanol forms in barley, seven of which were within 2 cM of sequences homologous to cloned genes associated with tocochromanol production in barley and/or other plants. These associations confirmed a prior report based on bi-parental QTL mapping. This knowledge will aid future efforts to better understand the role of tocochromanols in barley, with specific reference to abiotic stress resistance. It will also be useful in developing barley varieties with higher tocochromanol concentrations, although at current recommended daily consumption amounts, barley would not be an effective sole source of vitamin E. However, it could be an important contributor in the context of whole grains in a balanced diet. Public Library of Science 2015-07-24 /pmc/articles/PMC4514886/ /pubmed/26208213 http://dx.doi.org/10.1371/journal.pone.0133767 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration, which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. |
spellingShingle | Research Article Graebner, Ryan C. Wise, Mitchell Cuesta-Marcos, Alfonso Geniza, Matthew Blake, Tom Blake, Victoria C. Butler, Joshua Chao, Shiaomen Hole, David J. Horsley, Rich Jaiswal, Pankaj Obert, Don Smith, Kevin P. Ullrich, Steven Hayes, Patrick M. Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley |
title | Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley |
title_full | Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley |
title_fullStr | Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley |
title_full_unstemmed | Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley |
title_short | Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley |
title_sort | quantitative trait loci associated with the tocochromanol (vitamin e) pathway in barley |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4514886/ https://www.ncbi.nlm.nih.gov/pubmed/26208213 http://dx.doi.org/10.1371/journal.pone.0133767 |
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