Draft genomic sequence of a selenite-reducing bacterium, Paenirhodobacter enshiensis DW2-9(T)

Paenirhodobacter enshiensis is a non-photosynthetic species that belongs to family Rhodobacteraceae. Here we report the draft genome sequence of Paenirhodobacter enshiensis DW2-9(T) and comparison results to the available related genomes. The strain has a 3.4 Mbp genome sequence with G + C content o...

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Autores principales: Wang, Dan, Zhu, Fengqiu, Zhu, Xiaoli, Zheng, Shixue, Wang, Rui, Wang, Gejiao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517658/
https://www.ncbi.nlm.nih.gov/pubmed/26221419
http://dx.doi.org/10.1186/s40793-015-0026-9
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author Wang, Dan
Zhu, Fengqiu
Zhu, Xiaoli
Zheng, Shixue
Wang, Rui
Wang, Gejiao
author_facet Wang, Dan
Zhu, Fengqiu
Zhu, Xiaoli
Zheng, Shixue
Wang, Rui
Wang, Gejiao
author_sort Wang, Dan
collection PubMed
description Paenirhodobacter enshiensis is a non-photosynthetic species that belongs to family Rhodobacteraceae. Here we report the draft genome sequence of Paenirhodobacter enshiensis DW2-9(T) and comparison results to the available related genomes. The strain has a 3.4 Mbp genome sequence with G + C content of 66.82 % and 2781 protein-coding genes. It lacks photosynthetic gene clusters and putative proteins necessary in Embden-Meyerhof-Parnas (EMP) pathway, but contains proteins in Entner-Doudoroff (ED) pathway instead. It shares 699 common genes with nine related Rhodobacteraceae genomes, and possesses 315 specific genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0026-9) contains supplementary material, which is available to authorized users.
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spelling pubmed-45176582015-07-29 Draft genomic sequence of a selenite-reducing bacterium, Paenirhodobacter enshiensis DW2-9(T) Wang, Dan Zhu, Fengqiu Zhu, Xiaoli Zheng, Shixue Wang, Rui Wang, Gejiao Stand Genomic Sci Short Genome Report Paenirhodobacter enshiensis is a non-photosynthetic species that belongs to family Rhodobacteraceae. Here we report the draft genome sequence of Paenirhodobacter enshiensis DW2-9(T) and comparison results to the available related genomes. The strain has a 3.4 Mbp genome sequence with G + C content of 66.82 % and 2781 protein-coding genes. It lacks photosynthetic gene clusters and putative proteins necessary in Embden-Meyerhof-Parnas (EMP) pathway, but contains proteins in Entner-Doudoroff (ED) pathway instead. It shares 699 common genes with nine related Rhodobacteraceae genomes, and possesses 315 specific genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0026-9) contains supplementary material, which is available to authorized users. BioMed Central 2015-07-18 /pmc/articles/PMC4517658/ /pubmed/26221419 http://dx.doi.org/10.1186/s40793-015-0026-9 Text en © Wang et al. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Wang, Dan
Zhu, Fengqiu
Zhu, Xiaoli
Zheng, Shixue
Wang, Rui
Wang, Gejiao
Draft genomic sequence of a selenite-reducing bacterium, Paenirhodobacter enshiensis DW2-9(T)
title Draft genomic sequence of a selenite-reducing bacterium, Paenirhodobacter enshiensis DW2-9(T)
title_full Draft genomic sequence of a selenite-reducing bacterium, Paenirhodobacter enshiensis DW2-9(T)
title_fullStr Draft genomic sequence of a selenite-reducing bacterium, Paenirhodobacter enshiensis DW2-9(T)
title_full_unstemmed Draft genomic sequence of a selenite-reducing bacterium, Paenirhodobacter enshiensis DW2-9(T)
title_short Draft genomic sequence of a selenite-reducing bacterium, Paenirhodobacter enshiensis DW2-9(T)
title_sort draft genomic sequence of a selenite-reducing bacterium, paenirhodobacter enshiensis dw2-9(t)
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517658/
https://www.ncbi.nlm.nih.gov/pubmed/26221419
http://dx.doi.org/10.1186/s40793-015-0026-9
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