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High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland

Rhizobium leguminosarum bv. viciae GB30 is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of Pisum sativum. GB30 was isolated in Poland from a nodule recovered from the roots of Pisum sativum growing at Janow. GB30 is also an...

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Autores principales: Mazur, Andrzej, De Meyer, Sofie E., Tian, Rui, Wielbo, Jerzy, Zebracki, Kamil, Seshadri, Rekha, Reddy, TBK, Markowitz, Victor, Ivanova, Natalia N., Pati, Amrita, Woyke, Tanja, Kyrpides, Nikos C., Reeve, Wayne
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517663/
https://www.ncbi.nlm.nih.gov/pubmed/26221417
http://dx.doi.org/10.1186/s40793-015-0029-6
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author Mazur, Andrzej
De Meyer, Sofie E.
Tian, Rui
Wielbo, Jerzy
Zebracki, Kamil
Seshadri, Rekha
Reddy, TBK
Markowitz, Victor
Ivanova, Natalia N.
Pati, Amrita
Woyke, Tanja
Kyrpides, Nikos C.
Reeve, Wayne
author_facet Mazur, Andrzej
De Meyer, Sofie E.
Tian, Rui
Wielbo, Jerzy
Zebracki, Kamil
Seshadri, Rekha
Reddy, TBK
Markowitz, Victor
Ivanova, Natalia N.
Pati, Amrita
Woyke, Tanja
Kyrpides, Nikos C.
Reeve, Wayne
author_sort Mazur, Andrzej
collection PubMed
description Rhizobium leguminosarum bv. viciae GB30 is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of Pisum sativum. GB30 was isolated in Poland from a nodule recovered from the roots of Pisum sativum growing at Janow. GB30 is also an effective microsymbiont of the annual forage legumes vetch and pea. Here we describe the features of R. leguminosarum bv. viciae strain GB30, together with sequence and annotation. The 7,468,464 bp high-quality permanent draft genome is arranged in 78 scaffolds of 78 contigs containing 7,227 protein-coding genes and 75 RNA-only encoding genes, and is part of the GEBA-RNB project proposal. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0029-6) contains supplementary material, which is available to authorized users.
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spelling pubmed-45176632015-07-29 High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland Mazur, Andrzej De Meyer, Sofie E. Tian, Rui Wielbo, Jerzy Zebracki, Kamil Seshadri, Rekha Reddy, TBK Markowitz, Victor Ivanova, Natalia N. Pati, Amrita Woyke, Tanja Kyrpides, Nikos C. Reeve, Wayne Stand Genomic Sci Short Genome Report Rhizobium leguminosarum bv. viciae GB30 is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of Pisum sativum. GB30 was isolated in Poland from a nodule recovered from the roots of Pisum sativum growing at Janow. GB30 is also an effective microsymbiont of the annual forage legumes vetch and pea. Here we describe the features of R. leguminosarum bv. viciae strain GB30, together with sequence and annotation. The 7,468,464 bp high-quality permanent draft genome is arranged in 78 scaffolds of 78 contigs containing 7,227 protein-coding genes and 75 RNA-only encoding genes, and is part of the GEBA-RNB project proposal. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0029-6) contains supplementary material, which is available to authorized users. BioMed Central 2015-07-16 /pmc/articles/PMC4517663/ /pubmed/26221417 http://dx.doi.org/10.1186/s40793-015-0029-6 Text en © Mazur et al. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Mazur, Andrzej
De Meyer, Sofie E.
Tian, Rui
Wielbo, Jerzy
Zebracki, Kamil
Seshadri, Rekha
Reddy, TBK
Markowitz, Victor
Ivanova, Natalia N.
Pati, Amrita
Woyke, Tanja
Kyrpides, Nikos C.
Reeve, Wayne
High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland
title High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland
title_full High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland
title_fullStr High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland
title_full_unstemmed High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland
title_short High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland
title_sort high-quality permanent draft genome sequence of rhizobium leguminosarum bv. viciae strain gb30; an effective microsymbiont of pisum sativum growing in poland
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517663/
https://www.ncbi.nlm.nih.gov/pubmed/26221417
http://dx.doi.org/10.1186/s40793-015-0029-6
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