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High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland
Rhizobium leguminosarum bv. viciae GB30 is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of Pisum sativum. GB30 was isolated in Poland from a nodule recovered from the roots of Pisum sativum growing at Janow. GB30 is also an...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517663/ https://www.ncbi.nlm.nih.gov/pubmed/26221417 http://dx.doi.org/10.1186/s40793-015-0029-6 |
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author | Mazur, Andrzej De Meyer, Sofie E. Tian, Rui Wielbo, Jerzy Zebracki, Kamil Seshadri, Rekha Reddy, TBK Markowitz, Victor Ivanova, Natalia N. Pati, Amrita Woyke, Tanja Kyrpides, Nikos C. Reeve, Wayne |
author_facet | Mazur, Andrzej De Meyer, Sofie E. Tian, Rui Wielbo, Jerzy Zebracki, Kamil Seshadri, Rekha Reddy, TBK Markowitz, Victor Ivanova, Natalia N. Pati, Amrita Woyke, Tanja Kyrpides, Nikos C. Reeve, Wayne |
author_sort | Mazur, Andrzej |
collection | PubMed |
description | Rhizobium leguminosarum bv. viciae GB30 is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of Pisum sativum. GB30 was isolated in Poland from a nodule recovered from the roots of Pisum sativum growing at Janow. GB30 is also an effective microsymbiont of the annual forage legumes vetch and pea. Here we describe the features of R. leguminosarum bv. viciae strain GB30, together with sequence and annotation. The 7,468,464 bp high-quality permanent draft genome is arranged in 78 scaffolds of 78 contigs containing 7,227 protein-coding genes and 75 RNA-only encoding genes, and is part of the GEBA-RNB project proposal. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0029-6) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4517663 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-45176632015-07-29 High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland Mazur, Andrzej De Meyer, Sofie E. Tian, Rui Wielbo, Jerzy Zebracki, Kamil Seshadri, Rekha Reddy, TBK Markowitz, Victor Ivanova, Natalia N. Pati, Amrita Woyke, Tanja Kyrpides, Nikos C. Reeve, Wayne Stand Genomic Sci Short Genome Report Rhizobium leguminosarum bv. viciae GB30 is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of Pisum sativum. GB30 was isolated in Poland from a nodule recovered from the roots of Pisum sativum growing at Janow. GB30 is also an effective microsymbiont of the annual forage legumes vetch and pea. Here we describe the features of R. leguminosarum bv. viciae strain GB30, together with sequence and annotation. The 7,468,464 bp high-quality permanent draft genome is arranged in 78 scaffolds of 78 contigs containing 7,227 protein-coding genes and 75 RNA-only encoding genes, and is part of the GEBA-RNB project proposal. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0029-6) contains supplementary material, which is available to authorized users. BioMed Central 2015-07-16 /pmc/articles/PMC4517663/ /pubmed/26221417 http://dx.doi.org/10.1186/s40793-015-0029-6 Text en © Mazur et al. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Genome Report Mazur, Andrzej De Meyer, Sofie E. Tian, Rui Wielbo, Jerzy Zebracki, Kamil Seshadri, Rekha Reddy, TBK Markowitz, Victor Ivanova, Natalia N. Pati, Amrita Woyke, Tanja Kyrpides, Nikos C. Reeve, Wayne High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland |
title | High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland |
title_full | High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland |
title_fullStr | High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland |
title_full_unstemmed | High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland |
title_short | High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland |
title_sort | high-quality permanent draft genome sequence of rhizobium leguminosarum bv. viciae strain gb30; an effective microsymbiont of pisum sativum growing in poland |
topic | Short Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517663/ https://www.ncbi.nlm.nih.gov/pubmed/26221417 http://dx.doi.org/10.1186/s40793-015-0029-6 |
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