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High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov.

Strain FF4(T) was isolated from the skin flora of a 16-year-old healthy Senegalese female. This strain exhibited a 16S rRNA sequence similarity of 97.5 % with Bacillus fumarioli, the phylogenetically closest species with standing in nomenclature and a poor MALDI-TOF-MS score (1.1 to 1.3) that does n...

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Autores principales: Lo, Cheikh Ibrahima, Padhmanabhan, Roshan, Mediannikov, Oleg, Terras, Jérôme, Robert, Catherine, Faye, Ngor, Raoult, Didier, Fournier, Pierre-Edouard, Fenollar, Florence
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517664/
https://www.ncbi.nlm.nih.gov/pubmed/26221422
http://dx.doi.org/10.1186/s40793-015-0019-8
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author Lo, Cheikh Ibrahima
Padhmanabhan, Roshan
Mediannikov, Oleg
Terras, Jérôme
Robert, Catherine
Faye, Ngor
Raoult, Didier
Fournier, Pierre-Edouard
Fenollar, Florence
author_facet Lo, Cheikh Ibrahima
Padhmanabhan, Roshan
Mediannikov, Oleg
Terras, Jérôme
Robert, Catherine
Faye, Ngor
Raoult, Didier
Fournier, Pierre-Edouard
Fenollar, Florence
author_sort Lo, Cheikh Ibrahima
collection PubMed
description Strain FF4(T) was isolated from the skin flora of a 16-year-old healthy Senegalese female. This strain exhibited a 16S rRNA sequence similarity of 97.5 % with Bacillus fumarioli, the phylogenetically closest species with standing in nomenclature and a poor MALDI-TOF-MS score (1.1 to 1.3) that does not allow any identification. Using a polyphasic study consisting of phenotypic and genomic analyses, strain FF4(T) was Gram-positive, aerobic, rod-shaped, and exhibited a genome of 4,563,381 bp (1 chromosome but no plasmid) with a G + C content of 40.8 % that coded 4,308 protein-coding and 157 RNA genes (including 5 rRNA operons). On the basis of these data, we propose the creation of Bacillus dielmoensis sp. nov. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0019-8) contains supplementary material, which is available to authorized users.
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spelling pubmed-45176642015-07-29 High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov. Lo, Cheikh Ibrahima Padhmanabhan, Roshan Mediannikov, Oleg Terras, Jérôme Robert, Catherine Faye, Ngor Raoult, Didier Fournier, Pierre-Edouard Fenollar, Florence Stand Genomic Sci Short Genome Report Strain FF4(T) was isolated from the skin flora of a 16-year-old healthy Senegalese female. This strain exhibited a 16S rRNA sequence similarity of 97.5 % with Bacillus fumarioli, the phylogenetically closest species with standing in nomenclature and a poor MALDI-TOF-MS score (1.1 to 1.3) that does not allow any identification. Using a polyphasic study consisting of phenotypic and genomic analyses, strain FF4(T) was Gram-positive, aerobic, rod-shaped, and exhibited a genome of 4,563,381 bp (1 chromosome but no plasmid) with a G + C content of 40.8 % that coded 4,308 protein-coding and 157 RNA genes (including 5 rRNA operons). On the basis of these data, we propose the creation of Bacillus dielmoensis sp. nov. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0019-8) contains supplementary material, which is available to authorized users. BioMed Central 2015-07-22 /pmc/articles/PMC4517664/ /pubmed/26221422 http://dx.doi.org/10.1186/s40793-015-0019-8 Text en © Lo et al. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Lo, Cheikh Ibrahima
Padhmanabhan, Roshan
Mediannikov, Oleg
Terras, Jérôme
Robert, Catherine
Faye, Ngor
Raoult, Didier
Fournier, Pierre-Edouard
Fenollar, Florence
High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov.
title High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov.
title_full High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov.
title_fullStr High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov.
title_full_unstemmed High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov.
title_short High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov.
title_sort high-quality genome sequence and description of bacillus dielmoensis strain ff4(t) sp. nov.
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517664/
https://www.ncbi.nlm.nih.gov/pubmed/26221422
http://dx.doi.org/10.1186/s40793-015-0019-8
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