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High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov.
Strain FF4(T) was isolated from the skin flora of a 16-year-old healthy Senegalese female. This strain exhibited a 16S rRNA sequence similarity of 97.5 % with Bacillus fumarioli, the phylogenetically closest species with standing in nomenclature and a poor MALDI-TOF-MS score (1.1 to 1.3) that does n...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517664/ https://www.ncbi.nlm.nih.gov/pubmed/26221422 http://dx.doi.org/10.1186/s40793-015-0019-8 |
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author | Lo, Cheikh Ibrahima Padhmanabhan, Roshan Mediannikov, Oleg Terras, Jérôme Robert, Catherine Faye, Ngor Raoult, Didier Fournier, Pierre-Edouard Fenollar, Florence |
author_facet | Lo, Cheikh Ibrahima Padhmanabhan, Roshan Mediannikov, Oleg Terras, Jérôme Robert, Catherine Faye, Ngor Raoult, Didier Fournier, Pierre-Edouard Fenollar, Florence |
author_sort | Lo, Cheikh Ibrahima |
collection | PubMed |
description | Strain FF4(T) was isolated from the skin flora of a 16-year-old healthy Senegalese female. This strain exhibited a 16S rRNA sequence similarity of 97.5 % with Bacillus fumarioli, the phylogenetically closest species with standing in nomenclature and a poor MALDI-TOF-MS score (1.1 to 1.3) that does not allow any identification. Using a polyphasic study consisting of phenotypic and genomic analyses, strain FF4(T) was Gram-positive, aerobic, rod-shaped, and exhibited a genome of 4,563,381 bp (1 chromosome but no plasmid) with a G + C content of 40.8 % that coded 4,308 protein-coding and 157 RNA genes (including 5 rRNA operons). On the basis of these data, we propose the creation of Bacillus dielmoensis sp. nov. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0019-8) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4517664 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-45176642015-07-29 High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov. Lo, Cheikh Ibrahima Padhmanabhan, Roshan Mediannikov, Oleg Terras, Jérôme Robert, Catherine Faye, Ngor Raoult, Didier Fournier, Pierre-Edouard Fenollar, Florence Stand Genomic Sci Short Genome Report Strain FF4(T) was isolated from the skin flora of a 16-year-old healthy Senegalese female. This strain exhibited a 16S rRNA sequence similarity of 97.5 % with Bacillus fumarioli, the phylogenetically closest species with standing in nomenclature and a poor MALDI-TOF-MS score (1.1 to 1.3) that does not allow any identification. Using a polyphasic study consisting of phenotypic and genomic analyses, strain FF4(T) was Gram-positive, aerobic, rod-shaped, and exhibited a genome of 4,563,381 bp (1 chromosome but no plasmid) with a G + C content of 40.8 % that coded 4,308 protein-coding and 157 RNA genes (including 5 rRNA operons). On the basis of these data, we propose the creation of Bacillus dielmoensis sp. nov. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0019-8) contains supplementary material, which is available to authorized users. BioMed Central 2015-07-22 /pmc/articles/PMC4517664/ /pubmed/26221422 http://dx.doi.org/10.1186/s40793-015-0019-8 Text en © Lo et al. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Genome Report Lo, Cheikh Ibrahima Padhmanabhan, Roshan Mediannikov, Oleg Terras, Jérôme Robert, Catherine Faye, Ngor Raoult, Didier Fournier, Pierre-Edouard Fenollar, Florence High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov. |
title | High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov. |
title_full | High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov. |
title_fullStr | High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov. |
title_full_unstemmed | High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov. |
title_short | High-quality genome sequence and description of Bacillus dielmoensis strain FF4(T) sp. nov. |
title_sort | high-quality genome sequence and description of bacillus dielmoensis strain ff4(t) sp. nov. |
topic | Short Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517664/ https://www.ncbi.nlm.nih.gov/pubmed/26221422 http://dx.doi.org/10.1186/s40793-015-0019-8 |
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