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iTRAQ-based proteomic profiling of Vibrio parahaemolyticus under various culture conditions
BACKGROUND: Vibrio parahaemolyticus is a common pathogen infecting humans and marine animals; this pathogen has become a major concern of marine food products and trade. In this study, V. parahaemolyticus isolated from sewage was exposed to different culture conditions and analyzed by isobaric tag f...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4518887/ https://www.ncbi.nlm.nih.gov/pubmed/26225125 http://dx.doi.org/10.1186/s12953-015-0075-4 |
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author | Yang, Wenxin Ding, Dewen Zhang, Chundan Zhou, Jun Su, Xiurong |
author_facet | Yang, Wenxin Ding, Dewen Zhang, Chundan Zhou, Jun Su, Xiurong |
author_sort | Yang, Wenxin |
collection | PubMed |
description | BACKGROUND: Vibrio parahaemolyticus is a common pathogen infecting humans and marine animals; this pathogen has become a major concern of marine food products and trade. In this study, V. parahaemolyticus isolated from sewage was exposed to different culture conditions and analyzed by isobaric tag for relative and absolute quantitation (iTRAQ) based reversed-phase liquid chromatography-tandem mass spectrometry (LC-MS/MS) technique. Our goal is to gain further insights into the proteomics of V. parahaemolyticus, particularly differentially expressed proteins closely correlated with growth conditions and pathogenicity associated proteins. RESULTS: In this study, a total of 2,717 proteins including numerous membrane proteins were significantly identified, and 616 proteins displayed significant differential expression under different conditions. Of them, 12 proteins mainly participating in metabolism showed the most elastic expression differentiation between different culture conditions. Some membrane proteins such as type I secretion outer membrane protein, TolC, lipoprotein, efflux system proteins iron-regulated protein A and putaive Fe-regulated protein B, ferric siderophore receptor homolog and several V. parahaemolyticus virulence-associated proteins were differentially regulated under different conditions. Some differentially regulated proteins were analyzed and confirmed at gene expression level by quantitative real time polymerase chain reaction (qRT-PCR). CONCLUSIONS: Proteomics analysis results revealed the characteristics of V. parahaemolyticus proteome expression, provided some promising biomarkers related with growth conditions, the results likely advance insights into the mechanism involved in the response of V. parahaemolyticus to different conditions. Some virulence-associated proteins were discovered to be differentially expressed under different conditions. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12953-015-0075-4) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4518887 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-45188872015-07-30 iTRAQ-based proteomic profiling of Vibrio parahaemolyticus under various culture conditions Yang, Wenxin Ding, Dewen Zhang, Chundan Zhou, Jun Su, Xiurong Proteome Sci Research Article BACKGROUND: Vibrio parahaemolyticus is a common pathogen infecting humans and marine animals; this pathogen has become a major concern of marine food products and trade. In this study, V. parahaemolyticus isolated from sewage was exposed to different culture conditions and analyzed by isobaric tag for relative and absolute quantitation (iTRAQ) based reversed-phase liquid chromatography-tandem mass spectrometry (LC-MS/MS) technique. Our goal is to gain further insights into the proteomics of V. parahaemolyticus, particularly differentially expressed proteins closely correlated with growth conditions and pathogenicity associated proteins. RESULTS: In this study, a total of 2,717 proteins including numerous membrane proteins were significantly identified, and 616 proteins displayed significant differential expression under different conditions. Of them, 12 proteins mainly participating in metabolism showed the most elastic expression differentiation between different culture conditions. Some membrane proteins such as type I secretion outer membrane protein, TolC, lipoprotein, efflux system proteins iron-regulated protein A and putaive Fe-regulated protein B, ferric siderophore receptor homolog and several V. parahaemolyticus virulence-associated proteins were differentially regulated under different conditions. Some differentially regulated proteins were analyzed and confirmed at gene expression level by quantitative real time polymerase chain reaction (qRT-PCR). CONCLUSIONS: Proteomics analysis results revealed the characteristics of V. parahaemolyticus proteome expression, provided some promising biomarkers related with growth conditions, the results likely advance insights into the mechanism involved in the response of V. parahaemolyticus to different conditions. Some virulence-associated proteins were discovered to be differentially expressed under different conditions. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12953-015-0075-4) contains supplementary material, which is available to authorized users. BioMed Central 2015-07-29 /pmc/articles/PMC4518887/ /pubmed/26225125 http://dx.doi.org/10.1186/s12953-015-0075-4 Text en © Yang et al. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Yang, Wenxin Ding, Dewen Zhang, Chundan Zhou, Jun Su, Xiurong iTRAQ-based proteomic profiling of Vibrio parahaemolyticus under various culture conditions |
title | iTRAQ-based proteomic profiling of Vibrio parahaemolyticus under various culture conditions |
title_full | iTRAQ-based proteomic profiling of Vibrio parahaemolyticus under various culture conditions |
title_fullStr | iTRAQ-based proteomic profiling of Vibrio parahaemolyticus under various culture conditions |
title_full_unstemmed | iTRAQ-based proteomic profiling of Vibrio parahaemolyticus under various culture conditions |
title_short | iTRAQ-based proteomic profiling of Vibrio parahaemolyticus under various culture conditions |
title_sort | itraq-based proteomic profiling of vibrio parahaemolyticus under various culture conditions |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4518887/ https://www.ncbi.nlm.nih.gov/pubmed/26225125 http://dx.doi.org/10.1186/s12953-015-0075-4 |
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