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Redetermined structure of gossypol (P3 polymorph)

An improved crystal structure of the title compound, C(30)H(30)O(8) (systematic name: 1,1′,6,6′,7,7′-hexa­hydroxy-5,5′-diisopropyl-3,3′-dimeth­yl[2,2′-bi­naphthalene]-8,8′-dicarbaldehyde), was determined based on modern CCD data. Compared to the previous structure [Talipov et al. (1985). Khim. Priro...

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Autores principales: Honkeldieva, Muhabbat, Kunafiev, Rishad, Hamidov, Hayrullo I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4518924/
https://www.ncbi.nlm.nih.gov/pubmed/26279897
http://dx.doi.org/10.1107/S205698901500941X
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author Honkeldieva, Muhabbat
Kunafiev, Rishad
Hamidov, Hayrullo I.
author_facet Honkeldieva, Muhabbat
Kunafiev, Rishad
Hamidov, Hayrullo I.
author_sort Honkeldieva, Muhabbat
collection PubMed
description An improved crystal structure of the title compound, C(30)H(30)O(8) (systematic name: 1,1′,6,6′,7,7′-hexa­hydroxy-5,5′-diisopropyl-3,3′-dimeth­yl[2,2′-bi­naphthalene]-8,8′-dicarbaldehyde), was determined based on modern CCD data. Compared to the previous structure [Talipov et al. (1985). Khim. Prirod. Soedin. (Chem. Nat. Prod.), 6, 20–24], geometrical precision has been improved (typical C—C bond-distance s.u. = 0.002 Å in the present structure compared to 0.005 Å in the previous structure) and the locations of several H atoms have been corrected. The gossypol mol­ecules are in the aldehyde tautomeric form and the dihedral angle between the naphthyl fragments is 80.42 (4)°. Four intra­molecular O—H⋯O hydrogen bonds are formed. In the crystal, inversion dimers with graph-set motif R (2) (2)(20) are formed by pairs of O—H⋯O hydrogen bonds; another pair of O—H⋯O hydrogen bonds with the same graph-set motif links the dimers into [001] chains. The packing of such chains in the crystal leads to the formation of channels (diameter = 5–8 Å) propagating in the [101] direction. The channels presumably contain highly disordered solvent mol­ecules; their contribution to the scattering was removed with the SQUEEZE [Spek (2015). Acta Cryst. C71, 9–18] routine in PLATON and the stated mol­ecular mass, density etc., do not take them into account.
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spelling pubmed-45189242015-08-14 Redetermined structure of gossypol (P3 polymorph) Honkeldieva, Muhabbat Kunafiev, Rishad Hamidov, Hayrullo I. Acta Crystallogr E Crystallogr Commun Data Reports An improved crystal structure of the title compound, C(30)H(30)O(8) (systematic name: 1,1′,6,6′,7,7′-hexa­hydroxy-5,5′-diisopropyl-3,3′-dimeth­yl[2,2′-bi­naphthalene]-8,8′-dicarbaldehyde), was determined based on modern CCD data. Compared to the previous structure [Talipov et al. (1985). Khim. Prirod. Soedin. (Chem. Nat. Prod.), 6, 20–24], geometrical precision has been improved (typical C—C bond-distance s.u. = 0.002 Å in the present structure compared to 0.005 Å in the previous structure) and the locations of several H atoms have been corrected. The gossypol mol­ecules are in the aldehyde tautomeric form and the dihedral angle between the naphthyl fragments is 80.42 (4)°. Four intra­molecular O—H⋯O hydrogen bonds are formed. In the crystal, inversion dimers with graph-set motif R (2) (2)(20) are formed by pairs of O—H⋯O hydrogen bonds; another pair of O—H⋯O hydrogen bonds with the same graph-set motif links the dimers into [001] chains. The packing of such chains in the crystal leads to the formation of channels (diameter = 5–8 Å) propagating in the [101] direction. The channels presumably contain highly disordered solvent mol­ecules; their contribution to the scattering was removed with the SQUEEZE [Spek (2015). Acta Cryst. C71, 9–18] routine in PLATON and the stated mol­ecular mass, density etc., do not take them into account. International Union of Crystallography 2015-06-03 /pmc/articles/PMC4518924/ /pubmed/26279897 http://dx.doi.org/10.1107/S205698901500941X Text en © Honkeldieva et al. 2015 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Data Reports
Honkeldieva, Muhabbat
Kunafiev, Rishad
Hamidov, Hayrullo I.
Redetermined structure of gossypol (P3 polymorph)
title Redetermined structure of gossypol (P3 polymorph)
title_full Redetermined structure of gossypol (P3 polymorph)
title_fullStr Redetermined structure of gossypol (P3 polymorph)
title_full_unstemmed Redetermined structure of gossypol (P3 polymorph)
title_short Redetermined structure of gossypol (P3 polymorph)
title_sort redetermined structure of gossypol (p3 polymorph)
topic Data Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4518924/
https://www.ncbi.nlm.nih.gov/pubmed/26279897
http://dx.doi.org/10.1107/S205698901500941X
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