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Redetermined structure of gossypol (P3 polymorph)
An improved crystal structure of the title compound, C(30)H(30)O(8) (systematic name: 1,1′,6,6′,7,7′-hexahydroxy-5,5′-diisopropyl-3,3′-dimethyl[2,2′-binaphthalene]-8,8′-dicarbaldehyde), was determined based on modern CCD data. Compared to the previous structure [Talipov et al. (1985). Khim. Priro...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2015
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4518924/ https://www.ncbi.nlm.nih.gov/pubmed/26279897 http://dx.doi.org/10.1107/S205698901500941X |
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author | Honkeldieva, Muhabbat Kunafiev, Rishad Hamidov, Hayrullo I. |
author_facet | Honkeldieva, Muhabbat Kunafiev, Rishad Hamidov, Hayrullo I. |
author_sort | Honkeldieva, Muhabbat |
collection | PubMed |
description | An improved crystal structure of the title compound, C(30)H(30)O(8) (systematic name: 1,1′,6,6′,7,7′-hexahydroxy-5,5′-diisopropyl-3,3′-dimethyl[2,2′-binaphthalene]-8,8′-dicarbaldehyde), was determined based on modern CCD data. Compared to the previous structure [Talipov et al. (1985). Khim. Prirod. Soedin. (Chem. Nat. Prod.), 6, 20–24], geometrical precision has been improved (typical C—C bond-distance s.u. = 0.002 Å in the present structure compared to 0.005 Å in the previous structure) and the locations of several H atoms have been corrected. The gossypol molecules are in the aldehyde tautomeric form and the dihedral angle between the naphthyl fragments is 80.42 (4)°. Four intramolecular O—H⋯O hydrogen bonds are formed. In the crystal, inversion dimers with graph-set motif R (2) (2)(20) are formed by pairs of O—H⋯O hydrogen bonds; another pair of O—H⋯O hydrogen bonds with the same graph-set motif links the dimers into [001] chains. The packing of such chains in the crystal leads to the formation of channels (diameter = 5–8 Å) propagating in the [101] direction. The channels presumably contain highly disordered solvent molecules; their contribution to the scattering was removed with the SQUEEZE [Spek (2015). Acta Cryst. C71, 9–18] routine in PLATON and the stated molecular mass, density etc., do not take them into account. |
format | Online Article Text |
id | pubmed-4518924 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-45189242015-08-14 Redetermined structure of gossypol (P3 polymorph) Honkeldieva, Muhabbat Kunafiev, Rishad Hamidov, Hayrullo I. Acta Crystallogr E Crystallogr Commun Data Reports An improved crystal structure of the title compound, C(30)H(30)O(8) (systematic name: 1,1′,6,6′,7,7′-hexahydroxy-5,5′-diisopropyl-3,3′-dimethyl[2,2′-binaphthalene]-8,8′-dicarbaldehyde), was determined based on modern CCD data. Compared to the previous structure [Talipov et al. (1985). Khim. Prirod. Soedin. (Chem. Nat. Prod.), 6, 20–24], geometrical precision has been improved (typical C—C bond-distance s.u. = 0.002 Å in the present structure compared to 0.005 Å in the previous structure) and the locations of several H atoms have been corrected. The gossypol molecules are in the aldehyde tautomeric form and the dihedral angle between the naphthyl fragments is 80.42 (4)°. Four intramolecular O—H⋯O hydrogen bonds are formed. In the crystal, inversion dimers with graph-set motif R (2) (2)(20) are formed by pairs of O—H⋯O hydrogen bonds; another pair of O—H⋯O hydrogen bonds with the same graph-set motif links the dimers into [001] chains. The packing of such chains in the crystal leads to the formation of channels (diameter = 5–8 Å) propagating in the [101] direction. The channels presumably contain highly disordered solvent molecules; their contribution to the scattering was removed with the SQUEEZE [Spek (2015). Acta Cryst. C71, 9–18] routine in PLATON and the stated molecular mass, density etc., do not take them into account. International Union of Crystallography 2015-06-03 /pmc/articles/PMC4518924/ /pubmed/26279897 http://dx.doi.org/10.1107/S205698901500941X Text en © Honkeldieva et al. 2015 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Data Reports Honkeldieva, Muhabbat Kunafiev, Rishad Hamidov, Hayrullo I. Redetermined structure of gossypol (P3 polymorph) |
title | Redetermined structure of gossypol (P3 polymorph) |
title_full | Redetermined structure of gossypol (P3 polymorph) |
title_fullStr | Redetermined structure of gossypol (P3 polymorph) |
title_full_unstemmed | Redetermined structure of gossypol (P3 polymorph) |
title_short | Redetermined structure of gossypol (P3 polymorph) |
title_sort | redetermined structure of gossypol (p3 polymorph) |
topic | Data Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4518924/ https://www.ncbi.nlm.nih.gov/pubmed/26279897 http://dx.doi.org/10.1107/S205698901500941X |
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