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Structural Variation (SV) Markers in the Basidiomycete Volvariella volvacea and Their Application in the Construction of a Genetic Map
Molecular markers and genetic maps are useful tools in genetic studies. Novel molecular markers and their applications have been developed in recent years. With the recent advancements in sequencing technology, the genomic sequences of an increasingly great number of fungi have become available. A n...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4519972/ https://www.ncbi.nlm.nih.gov/pubmed/26204838 http://dx.doi.org/10.3390/ijms160716669 |
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author | Wang, Wei Chen, Bingzhi Zhang, Lei Yan, Junjie Lu, Yuanping Zhang, Xiaoyin Jiang, Yuji Wu, Taju van Peer, Arend Frans Li, Shaojie Xie, Baogui |
author_facet | Wang, Wei Chen, Bingzhi Zhang, Lei Yan, Junjie Lu, Yuanping Zhang, Xiaoyin Jiang, Yuji Wu, Taju van Peer, Arend Frans Li, Shaojie Xie, Baogui |
author_sort | Wang, Wei |
collection | PubMed |
description | Molecular markers and genetic maps are useful tools in genetic studies. Novel molecular markers and their applications have been developed in recent years. With the recent advancements in sequencing technology, the genomic sequences of an increasingly great number of fungi have become available. A novel type of molecular marker was developed to construct the first reported linkage map of the edible and economically important basidiomycete Volvariella volvacea by using 104 structural variation (SV) markers that are based on the genomic sequences. Because of the special and simple life cycle in basidiomycete, SV markers can be effectively developed by genomic comparison and tested in single spore isolates (SSIs). This stable, convenient and rapidly developed marker may assist in the construction of genetic maps and facilitate genomic research for other species of fungi. |
format | Online Article Text |
id | pubmed-4519972 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-45199722015-08-03 Structural Variation (SV) Markers in the Basidiomycete Volvariella volvacea and Their Application in the Construction of a Genetic Map Wang, Wei Chen, Bingzhi Zhang, Lei Yan, Junjie Lu, Yuanping Zhang, Xiaoyin Jiang, Yuji Wu, Taju van Peer, Arend Frans Li, Shaojie Xie, Baogui Int J Mol Sci Communication Molecular markers and genetic maps are useful tools in genetic studies. Novel molecular markers and their applications have been developed in recent years. With the recent advancements in sequencing technology, the genomic sequences of an increasingly great number of fungi have become available. A novel type of molecular marker was developed to construct the first reported linkage map of the edible and economically important basidiomycete Volvariella volvacea by using 104 structural variation (SV) markers that are based on the genomic sequences. Because of the special and simple life cycle in basidiomycete, SV markers can be effectively developed by genomic comparison and tested in single spore isolates (SSIs). This stable, convenient and rapidly developed marker may assist in the construction of genetic maps and facilitate genomic research for other species of fungi. MDPI 2015-07-22 /pmc/articles/PMC4519972/ /pubmed/26204838 http://dx.doi.org/10.3390/ijms160716669 Text en © 2015 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Communication Wang, Wei Chen, Bingzhi Zhang, Lei Yan, Junjie Lu, Yuanping Zhang, Xiaoyin Jiang, Yuji Wu, Taju van Peer, Arend Frans Li, Shaojie Xie, Baogui Structural Variation (SV) Markers in the Basidiomycete Volvariella volvacea and Their Application in the Construction of a Genetic Map |
title | Structural Variation (SV) Markers in the Basidiomycete Volvariella volvacea and Their Application in the Construction of a Genetic Map |
title_full | Structural Variation (SV) Markers in the Basidiomycete Volvariella volvacea and Their Application in the Construction of a Genetic Map |
title_fullStr | Structural Variation (SV) Markers in the Basidiomycete Volvariella volvacea and Their Application in the Construction of a Genetic Map |
title_full_unstemmed | Structural Variation (SV) Markers in the Basidiomycete Volvariella volvacea and Their Application in the Construction of a Genetic Map |
title_short | Structural Variation (SV) Markers in the Basidiomycete Volvariella volvacea and Their Application in the Construction of a Genetic Map |
title_sort | structural variation (sv) markers in the basidiomycete volvariella volvacea and their application in the construction of a genetic map |
topic | Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4519972/ https://www.ncbi.nlm.nih.gov/pubmed/26204838 http://dx.doi.org/10.3390/ijms160716669 |
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