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Quantifying demographic and socioeconomic transitions for computational epidemiology: an open-source modeling approach applied to India

BACKGROUND: Demographic and socioeconomic changes such as increasing urbanization, migration, and female education shape population health in many low- and middle-income countries. These changes are rarely reflected in computational epidemiological models, which are commonly used to understand popul...

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Autores principales: Basu, Sanjay, Goldhaber-Fiebert, Jeremy D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4521358/
https://www.ncbi.nlm.nih.gov/pubmed/26236157
http://dx.doi.org/10.1186/s12963-015-0053-1
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author Basu, Sanjay
Goldhaber-Fiebert, Jeremy D.
author_facet Basu, Sanjay
Goldhaber-Fiebert, Jeremy D.
author_sort Basu, Sanjay
collection PubMed
description BACKGROUND: Demographic and socioeconomic changes such as increasing urbanization, migration, and female education shape population health in many low- and middle-income countries. These changes are rarely reflected in computational epidemiological models, which are commonly used to understand population health trends and evaluate policy interventions. Our goal was to create a “backbone” simulation modeling approach to allow computational epidemiologists to explicitly reflect changing demographic and socioeconomic conditions in population health models. METHODS: We developed, evaluated, and “open-sourced” a generalized approach to incorporate longitudinal, commonly available demographic and socioeconomic data into epidemiological simulations, illustrating the feasibility and utility of our approach with data from India. We constructed a series of nested microsimulations of increasing complexity, calibrating each model to longitudinal sociodemographic and vital registration data. We then selected the model that was most consistent with the data (i.e., greater accuracy) while containing the fewest parameters (i.e., greater parsimony). We validated the selected model against additional data sources not used for calibration. RESULTS: We found that standard computational epidemiology models that do not incorporate demographic and socioeconomic trends quickly diverged from past mortality and population size estimates, while our approach remained consistent with observed data over decadal time courses. Our approach additionally enabled the examination of complex relations between demographic, socioeconomic and health parameters, such as the relationship between changes in educational attainment or urbanization and changes in fertility, mortality, and migration rates. CONCLUSIONS: Incorporating demographic and socioeconomic trends in computational epidemiology is feasible through the “open source” approach, and could critically alter population health projections and model-based evaluations of health policy interventions in unintuitive ways. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12963-015-0053-1) contains supplementary material, which is available to authorized users.
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spelling pubmed-45213582015-08-01 Quantifying demographic and socioeconomic transitions for computational epidemiology: an open-source modeling approach applied to India Basu, Sanjay Goldhaber-Fiebert, Jeremy D. Popul Health Metr Research BACKGROUND: Demographic and socioeconomic changes such as increasing urbanization, migration, and female education shape population health in many low- and middle-income countries. These changes are rarely reflected in computational epidemiological models, which are commonly used to understand population health trends and evaluate policy interventions. Our goal was to create a “backbone” simulation modeling approach to allow computational epidemiologists to explicitly reflect changing demographic and socioeconomic conditions in population health models. METHODS: We developed, evaluated, and “open-sourced” a generalized approach to incorporate longitudinal, commonly available demographic and socioeconomic data into epidemiological simulations, illustrating the feasibility and utility of our approach with data from India. We constructed a series of nested microsimulations of increasing complexity, calibrating each model to longitudinal sociodemographic and vital registration data. We then selected the model that was most consistent with the data (i.e., greater accuracy) while containing the fewest parameters (i.e., greater parsimony). We validated the selected model against additional data sources not used for calibration. RESULTS: We found that standard computational epidemiology models that do not incorporate demographic and socioeconomic trends quickly diverged from past mortality and population size estimates, while our approach remained consistent with observed data over decadal time courses. Our approach additionally enabled the examination of complex relations between demographic, socioeconomic and health parameters, such as the relationship between changes in educational attainment or urbanization and changes in fertility, mortality, and migration rates. CONCLUSIONS: Incorporating demographic and socioeconomic trends in computational epidemiology is feasible through the “open source” approach, and could critically alter population health projections and model-based evaluations of health policy interventions in unintuitive ways. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12963-015-0053-1) contains supplementary material, which is available to authorized users. BioMed Central 2015-08-01 /pmc/articles/PMC4521358/ /pubmed/26236157 http://dx.doi.org/10.1186/s12963-015-0053-1 Text en © Basu and Goldhaber-Fiebert. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Basu, Sanjay
Goldhaber-Fiebert, Jeremy D.
Quantifying demographic and socioeconomic transitions for computational epidemiology: an open-source modeling approach applied to India
title Quantifying demographic and socioeconomic transitions for computational epidemiology: an open-source modeling approach applied to India
title_full Quantifying demographic and socioeconomic transitions for computational epidemiology: an open-source modeling approach applied to India
title_fullStr Quantifying demographic and socioeconomic transitions for computational epidemiology: an open-source modeling approach applied to India
title_full_unstemmed Quantifying demographic and socioeconomic transitions for computational epidemiology: an open-source modeling approach applied to India
title_short Quantifying demographic and socioeconomic transitions for computational epidemiology: an open-source modeling approach applied to India
title_sort quantifying demographic and socioeconomic transitions for computational epidemiology: an open-source modeling approach applied to india
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4521358/
https://www.ncbi.nlm.nih.gov/pubmed/26236157
http://dx.doi.org/10.1186/s12963-015-0053-1
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