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The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology

Genetic screens are powerful tools to identify the genes required for a given biological process. However, for technical reasons, comprehensive screens have been restricted to very few model organisms. Therefore, although deep sequencing is revealing the genes of ever more insect species, the functi...

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Autores principales: Schmitt-Engel, Christian, Schultheis, Dorothea, Schwirz, Jonas, Ströhlein, Nadi, Troelenberg, Nicole, Majumdar, Upalparna, Dao, Van Anh, Grossmann, Daniela, Richter, Tobias, Tech, Maike, Dönitz, Jürgen, Gerischer, Lizzy, Theis, Mirko, Schild, Inga, Trauner, Jochen, Koniszewski, Nikolaus D. B., Küster, Elke, Kittelmann, Sebastian, Hu, Yonggang, Lehmann, Sabrina, Siemanowski, Janna, Ulrich, Julia, Panfilio, Kristen A., Schröder, Reinhard, Morgenstern, Burkhard, Stanke, Mario, Buchhholz, Frank, Frasch, Manfred, Roth, Siegfried, Wimmer, Ernst A., Schoppmeier, Michael, Klingler, Martin, Bucher, Gregor
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Pub. Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4525174/
https://www.ncbi.nlm.nih.gov/pubmed/26215380
http://dx.doi.org/10.1038/ncomms8822
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author Schmitt-Engel, Christian
Schultheis, Dorothea
Schwirz, Jonas
Ströhlein, Nadi
Troelenberg, Nicole
Majumdar, Upalparna
Dao, Van Anh
Grossmann, Daniela
Richter, Tobias
Tech, Maike
Dönitz, Jürgen
Gerischer, Lizzy
Theis, Mirko
Schild, Inga
Trauner, Jochen
Koniszewski, Nikolaus D. B.
Küster, Elke
Kittelmann, Sebastian
Hu, Yonggang
Lehmann, Sabrina
Siemanowski, Janna
Ulrich, Julia
Panfilio, Kristen A.
Schröder, Reinhard
Morgenstern, Burkhard
Stanke, Mario
Buchhholz, Frank
Frasch, Manfred
Roth, Siegfried
Wimmer, Ernst A.
Schoppmeier, Michael
Klingler, Martin
Bucher, Gregor
author_facet Schmitt-Engel, Christian
Schultheis, Dorothea
Schwirz, Jonas
Ströhlein, Nadi
Troelenberg, Nicole
Majumdar, Upalparna
Dao, Van Anh
Grossmann, Daniela
Richter, Tobias
Tech, Maike
Dönitz, Jürgen
Gerischer, Lizzy
Theis, Mirko
Schild, Inga
Trauner, Jochen
Koniszewski, Nikolaus D. B.
Küster, Elke
Kittelmann, Sebastian
Hu, Yonggang
Lehmann, Sabrina
Siemanowski, Janna
Ulrich, Julia
Panfilio, Kristen A.
Schröder, Reinhard
Morgenstern, Burkhard
Stanke, Mario
Buchhholz, Frank
Frasch, Manfred
Roth, Siegfried
Wimmer, Ernst A.
Schoppmeier, Michael
Klingler, Martin
Bucher, Gregor
author_sort Schmitt-Engel, Christian
collection PubMed
description Genetic screens are powerful tools to identify the genes required for a given biological process. However, for technical reasons, comprehensive screens have been restricted to very few model organisms. Therefore, although deep sequencing is revealing the genes of ever more insect species, the functional studies predominantly focus on candidate genes previously identified in Drosophila, which is biasing research towards conserved gene functions. RNAi screens in other organisms promise to reduce this bias. Here we present the results of the iBeetle screen, a large-scale, unbiased RNAi screen in the red flour beetle, Tribolium castaneum, which identifies gene functions in embryonic and postembryonic development, physiology and cell biology. The utility of Tribolium as a screening platform is demonstrated by the identification of genes involved in insect epithelial adhesion. This work transcends the restrictions of the candidate gene approach and opens fields of research not accessible in Drosophila.
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spelling pubmed-45251742015-09-04 The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology Schmitt-Engel, Christian Schultheis, Dorothea Schwirz, Jonas Ströhlein, Nadi Troelenberg, Nicole Majumdar, Upalparna Dao, Van Anh Grossmann, Daniela Richter, Tobias Tech, Maike Dönitz, Jürgen Gerischer, Lizzy Theis, Mirko Schild, Inga Trauner, Jochen Koniszewski, Nikolaus D. B. Küster, Elke Kittelmann, Sebastian Hu, Yonggang Lehmann, Sabrina Siemanowski, Janna Ulrich, Julia Panfilio, Kristen A. Schröder, Reinhard Morgenstern, Burkhard Stanke, Mario Buchhholz, Frank Frasch, Manfred Roth, Siegfried Wimmer, Ernst A. Schoppmeier, Michael Klingler, Martin Bucher, Gregor Nat Commun Article Genetic screens are powerful tools to identify the genes required for a given biological process. However, for technical reasons, comprehensive screens have been restricted to very few model organisms. Therefore, although deep sequencing is revealing the genes of ever more insect species, the functional studies predominantly focus on candidate genes previously identified in Drosophila, which is biasing research towards conserved gene functions. RNAi screens in other organisms promise to reduce this bias. Here we present the results of the iBeetle screen, a large-scale, unbiased RNAi screen in the red flour beetle, Tribolium castaneum, which identifies gene functions in embryonic and postembryonic development, physiology and cell biology. The utility of Tribolium as a screening platform is demonstrated by the identification of genes involved in insect epithelial adhesion. This work transcends the restrictions of the candidate gene approach and opens fields of research not accessible in Drosophila. Nature Pub. Group 2015-07-28 /pmc/articles/PMC4525174/ /pubmed/26215380 http://dx.doi.org/10.1038/ncomms8822 Text en Copyright © 2015, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Schmitt-Engel, Christian
Schultheis, Dorothea
Schwirz, Jonas
Ströhlein, Nadi
Troelenberg, Nicole
Majumdar, Upalparna
Dao, Van Anh
Grossmann, Daniela
Richter, Tobias
Tech, Maike
Dönitz, Jürgen
Gerischer, Lizzy
Theis, Mirko
Schild, Inga
Trauner, Jochen
Koniszewski, Nikolaus D. B.
Küster, Elke
Kittelmann, Sebastian
Hu, Yonggang
Lehmann, Sabrina
Siemanowski, Janna
Ulrich, Julia
Panfilio, Kristen A.
Schröder, Reinhard
Morgenstern, Burkhard
Stanke, Mario
Buchhholz, Frank
Frasch, Manfred
Roth, Siegfried
Wimmer, Ernst A.
Schoppmeier, Michael
Klingler, Martin
Bucher, Gregor
The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology
title The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology
title_full The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology
title_fullStr The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology
title_full_unstemmed The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology
title_short The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology
title_sort ibeetle large-scale rnai screen reveals gene functions for insect development and physiology
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4525174/
https://www.ncbi.nlm.nih.gov/pubmed/26215380
http://dx.doi.org/10.1038/ncomms8822
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