Cargando…
MetaSV: an accurate and integrative structural-variant caller for next generation sequencing
Summary: Structural variations (SVs) are large genomic rearrangements that vary significantly in size, making them challenging to detect with the relatively short reads from next-generation sequencing (NGS). Different SV detection methods have been developed; however, each is limited to specific kin...
Autores principales: | Mohiyuddin, Marghoob, Mu, John C., Li, Jian, Bani Asadi, Narges, Gerstein, Mark B., Abyzov, Alexej, Wong, Wing H., Lam, Hugo Y.K. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4528635/ https://www.ncbi.nlm.nih.gov/pubmed/25861968 http://dx.doi.org/10.1093/bioinformatics/btv204 |
Ejemplares similares
-
VarSim: a high-fidelity simulation and validation framework for high-throughput genome sequencing with cancer applications
por: Mu, John C., et al.
Publicado: (2015) -
LongISLND: in silico sequencing of lengthy and noisy datatypes
por: Lau, Bayo, et al.
Publicado: (2016) -
Pisces: an accurate and versatile variant caller for somatic and germline next-generation sequencing data
por: Dunn, Tamsen, et al.
Publicado: (2019) -
An ensemble approach to accurately detect somatic mutations using SomaticSeq
por: Fang, Li Tai, et al.
Publicado: (2015) -
LongAGE: defining breakpoints of genomic structural variants through optimal and memory efficient alignments of long reads
por: Tran, Quang, et al.
Publicado: (2020)