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A highly sensitive and specific method for the screening detection of genetically modified organisms based on digital PCR without pretreatment

Digital PCR has developed rapidly since it was first reported in the 1990s. It was recently reported that an improved method facilitated the detection of genetically modified organisms (GMOs). However, to use this improved method, the samples must be pretreated, which could introduce inaccuracy into...

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Autores principales: Fu, Wei, Zhu, Pengyu, Wang, Chenguang, Huang, Kunlun, Du, Zhixin, Tian, Wenying, Wang, Qin, Wang, Huiyu, Xu, Wentao, Zhu, Shuifang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4530665/
https://www.ncbi.nlm.nih.gov/pubmed/26239916
http://dx.doi.org/10.1038/srep12715
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author Fu, Wei
Zhu, Pengyu
Wang, Chenguang
Huang, Kunlun
Du, Zhixin
Tian, Wenying
Wang, Qin
Wang, Huiyu
Xu, Wentao
Zhu, Shuifang
author_facet Fu, Wei
Zhu, Pengyu
Wang, Chenguang
Huang, Kunlun
Du, Zhixin
Tian, Wenying
Wang, Qin
Wang, Huiyu
Xu, Wentao
Zhu, Shuifang
author_sort Fu, Wei
collection PubMed
description Digital PCR has developed rapidly since it was first reported in the 1990s. It was recently reported that an improved method facilitated the detection of genetically modified organisms (GMOs). However, to use this improved method, the samples must be pretreated, which could introduce inaccuracy into the results. In our study, we explored a pretreatment-free digital PCR detection method for the screening for GMOs. We chose the CaMV35s promoter and the NOS terminator as the templates in our assay. To determine the specificity of our method, 9 events of GMOs were collected, including MON810, MON863, TC1507, MIR604, MIR162, GA21, T25, NK603 and Bt176. Moreover, the sensitivity, intra-laboratory and inter-laboratory reproducibility of our detection method were assessed. The results showed that the limit of detection of our method was 0.1%, which was lower than the labeling threshold level of the EU. The specificity and stability among the 9 events were consistent, respectively. The intra-laboratory and inter-laboratory reproducibility were both good. Finally, the perfect fitness for the detection of eight double-blind samples indicated the good practicability of our method. In conclusion, the method in our study would allow more sensitive, specific and stable screening detection of the GMO content of international trading products.
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spelling pubmed-45306652015-08-11 A highly sensitive and specific method for the screening detection of genetically modified organisms based on digital PCR without pretreatment Fu, Wei Zhu, Pengyu Wang, Chenguang Huang, Kunlun Du, Zhixin Tian, Wenying Wang, Qin Wang, Huiyu Xu, Wentao Zhu, Shuifang Sci Rep Article Digital PCR has developed rapidly since it was first reported in the 1990s. It was recently reported that an improved method facilitated the detection of genetically modified organisms (GMOs). However, to use this improved method, the samples must be pretreated, which could introduce inaccuracy into the results. In our study, we explored a pretreatment-free digital PCR detection method for the screening for GMOs. We chose the CaMV35s promoter and the NOS terminator as the templates in our assay. To determine the specificity of our method, 9 events of GMOs were collected, including MON810, MON863, TC1507, MIR604, MIR162, GA21, T25, NK603 and Bt176. Moreover, the sensitivity, intra-laboratory and inter-laboratory reproducibility of our detection method were assessed. The results showed that the limit of detection of our method was 0.1%, which was lower than the labeling threshold level of the EU. The specificity and stability among the 9 events were consistent, respectively. The intra-laboratory and inter-laboratory reproducibility were both good. Finally, the perfect fitness for the detection of eight double-blind samples indicated the good practicability of our method. In conclusion, the method in our study would allow more sensitive, specific and stable screening detection of the GMO content of international trading products. Nature Publishing Group 2015-08-04 /pmc/articles/PMC4530665/ /pubmed/26239916 http://dx.doi.org/10.1038/srep12715 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Fu, Wei
Zhu, Pengyu
Wang, Chenguang
Huang, Kunlun
Du, Zhixin
Tian, Wenying
Wang, Qin
Wang, Huiyu
Xu, Wentao
Zhu, Shuifang
A highly sensitive and specific method for the screening detection of genetically modified organisms based on digital PCR without pretreatment
title A highly sensitive and specific method for the screening detection of genetically modified organisms based on digital PCR without pretreatment
title_full A highly sensitive and specific method for the screening detection of genetically modified organisms based on digital PCR without pretreatment
title_fullStr A highly sensitive and specific method for the screening detection of genetically modified organisms based on digital PCR without pretreatment
title_full_unstemmed A highly sensitive and specific method for the screening detection of genetically modified organisms based on digital PCR without pretreatment
title_short A highly sensitive and specific method for the screening detection of genetically modified organisms based on digital PCR without pretreatment
title_sort highly sensitive and specific method for the screening detection of genetically modified organisms based on digital pcr without pretreatment
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4530665/
https://www.ncbi.nlm.nih.gov/pubmed/26239916
http://dx.doi.org/10.1038/srep12715
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