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Compositional differences in simulated root exudates elicit a limited functional and compositional response in soil microbial communities

Inputs of low molecular weight carbon (LMW-C) to soil – primarily via root exudates– are expected to be a major driver of microbial activity and source of stable soil organic carbon. It is expected that variation in the type and composition of LMW-C entering soil will influence microbial community c...

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Autores principales: Strickland, Michael S., McCulley, Rebecca L., Nelson, Jim A., Bradford, Mark A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4532165/
https://www.ncbi.nlm.nih.gov/pubmed/26322029
http://dx.doi.org/10.3389/fmicb.2015.00817
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author Strickland, Michael S.
McCulley, Rebecca L.
Nelson, Jim A.
Bradford, Mark A.
author_facet Strickland, Michael S.
McCulley, Rebecca L.
Nelson, Jim A.
Bradford, Mark A.
author_sort Strickland, Michael S.
collection PubMed
description Inputs of low molecular weight carbon (LMW-C) to soil – primarily via root exudates– are expected to be a major driver of microbial activity and source of stable soil organic carbon. It is expected that variation in the type and composition of LMW-C entering soil will influence microbial community composition and function. If this is the case then short-term changes in LMW-C inputs may alter processes regulated by these communities. To determine if change in the composition of LMW-C inputs influences microbial community function and composition, we conducted a 90 day microcosm experiment whereby soils sourced from three different land covers (meadows, deciduous forests, and white pine stands) were amended, at low concentrations, with one of eight simulated root exudate treatments. Treatments included no addition of LMW-C, and the full factorial combination of glucose, glycine, and oxalic acid. After 90 days, we conducted a functional response assay and determined microbial composition via phospholipid fatty acid analysis. Whereas we noted a statistically significant effect of exudate treatments, this only accounted for ∼3% of the variation observed in function. In comparison, land cover and site explained ∼46 and ∼41% of the variation, respectively. This suggests that exudate composition has little influence on function compared to site/land cover specific factors. Supporting the finding that exudate effects were minor, we found that an absence of LMW-C elicited the greatest difference in function compared to those treatments receiving any LMW-C. Additionally, exudate treatments did not alter microbial community composition and observable differences were instead due to land cover. These results confirm the strong effects of land cover/site legacies on soil microbial communities. In contrast, short-term changes in exudate composition, at meaningful concentrations, may have little impact on microbial function and composition.
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spelling pubmed-45321652015-08-28 Compositional differences in simulated root exudates elicit a limited functional and compositional response in soil microbial communities Strickland, Michael S. McCulley, Rebecca L. Nelson, Jim A. Bradford, Mark A. Front Microbiol Microbiology Inputs of low molecular weight carbon (LMW-C) to soil – primarily via root exudates– are expected to be a major driver of microbial activity and source of stable soil organic carbon. It is expected that variation in the type and composition of LMW-C entering soil will influence microbial community composition and function. If this is the case then short-term changes in LMW-C inputs may alter processes regulated by these communities. To determine if change in the composition of LMW-C inputs influences microbial community function and composition, we conducted a 90 day microcosm experiment whereby soils sourced from three different land covers (meadows, deciduous forests, and white pine stands) were amended, at low concentrations, with one of eight simulated root exudate treatments. Treatments included no addition of LMW-C, and the full factorial combination of glucose, glycine, and oxalic acid. After 90 days, we conducted a functional response assay and determined microbial composition via phospholipid fatty acid analysis. Whereas we noted a statistically significant effect of exudate treatments, this only accounted for ∼3% of the variation observed in function. In comparison, land cover and site explained ∼46 and ∼41% of the variation, respectively. This suggests that exudate composition has little influence on function compared to site/land cover specific factors. Supporting the finding that exudate effects were minor, we found that an absence of LMW-C elicited the greatest difference in function compared to those treatments receiving any LMW-C. Additionally, exudate treatments did not alter microbial community composition and observable differences were instead due to land cover. These results confirm the strong effects of land cover/site legacies on soil microbial communities. In contrast, short-term changes in exudate composition, at meaningful concentrations, may have little impact on microbial function and composition. Frontiers Media S.A. 2015-08-11 /pmc/articles/PMC4532165/ /pubmed/26322029 http://dx.doi.org/10.3389/fmicb.2015.00817 Text en Copyright © 2015 Strickland, McCulley, Nelson and Bradford. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Strickland, Michael S.
McCulley, Rebecca L.
Nelson, Jim A.
Bradford, Mark A.
Compositional differences in simulated root exudates elicit a limited functional and compositional response in soil microbial communities
title Compositional differences in simulated root exudates elicit a limited functional and compositional response in soil microbial communities
title_full Compositional differences in simulated root exudates elicit a limited functional and compositional response in soil microbial communities
title_fullStr Compositional differences in simulated root exudates elicit a limited functional and compositional response in soil microbial communities
title_full_unstemmed Compositional differences in simulated root exudates elicit a limited functional and compositional response in soil microbial communities
title_short Compositional differences in simulated root exudates elicit a limited functional and compositional response in soil microbial communities
title_sort compositional differences in simulated root exudates elicit a limited functional and compositional response in soil microbial communities
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4532165/
https://www.ncbi.nlm.nih.gov/pubmed/26322029
http://dx.doi.org/10.3389/fmicb.2015.00817
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