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Rhizosphere bacterial communities of dominant steppe plants shift in response to a gradient of simulated nitrogen deposition

We evaluated effects of 9-year simulated nitrogen (N) deposition on microbial composition and diversity in the rhizosphere of two dominant temperate grassland species: grass Stipa krylovii and forb Artemisia frigida. Microbiomes in S. krylovii and A. frigida rhizosphere differed, but changed consist...

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Autores principales: Yang, An, Liu, Nana, Tian, Qiuying, Bai, Wenming, Williams, Mark, Wang, Qibing, Li, Linghao, Zhang, Wen-Hao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4533001/
https://www.ncbi.nlm.nih.gov/pubmed/26322024
http://dx.doi.org/10.3389/fmicb.2015.00789
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author Yang, An
Liu, Nana
Tian, Qiuying
Bai, Wenming
Williams, Mark
Wang, Qibing
Li, Linghao
Zhang, Wen-Hao
author_facet Yang, An
Liu, Nana
Tian, Qiuying
Bai, Wenming
Williams, Mark
Wang, Qibing
Li, Linghao
Zhang, Wen-Hao
author_sort Yang, An
collection PubMed
description We evaluated effects of 9-year simulated nitrogen (N) deposition on microbial composition and diversity in the rhizosphere of two dominant temperate grassland species: grass Stipa krylovii and forb Artemisia frigida. Microbiomes in S. krylovii and A. frigida rhizosphere differed, but changed consistently along the N gradient. These changes were correlated to N-induced shifts to plant community. Hence, as plant biomass changed, so did bacterial rhizosphere communities, a result consistent with the role that N fertilizer has been shown to play in altering plant-microbial mutualisms. A total of 23 bacterial phyla were detected in the two rhizospheric soils by pyrosequencing, with Proteobacteria, Acidobacteria, and Bacteroidetes dominating the sequences of all samples. Bacterioidetes and Proteobacteria tended to increase, while Acidobacteria declined with increase in N addition rates. TM7 increased >5-fold in the high N addition rates, especially in S. krylovii rhizosphere. Nitrogen addition also decreased diversity of OTUs (operational taxonomic units), Shannon and Chao1 indices of rhizospheric microbes regardless of plant species. These results suggest that there were both similar but also specific changes in microbial communities of temperate steppes due to N deposition. These findings would contribute to our mechanistic understanding of impacts of N deposition on grassland ecosystem by linking changes in plant traits to their rhizospheric microbes-mediated processes.
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spelling pubmed-45330012015-08-28 Rhizosphere bacterial communities of dominant steppe plants shift in response to a gradient of simulated nitrogen deposition Yang, An Liu, Nana Tian, Qiuying Bai, Wenming Williams, Mark Wang, Qibing Li, Linghao Zhang, Wen-Hao Front Microbiol Microbiology We evaluated effects of 9-year simulated nitrogen (N) deposition on microbial composition and diversity in the rhizosphere of two dominant temperate grassland species: grass Stipa krylovii and forb Artemisia frigida. Microbiomes in S. krylovii and A. frigida rhizosphere differed, but changed consistently along the N gradient. These changes were correlated to N-induced shifts to plant community. Hence, as plant biomass changed, so did bacterial rhizosphere communities, a result consistent with the role that N fertilizer has been shown to play in altering plant-microbial mutualisms. A total of 23 bacterial phyla were detected in the two rhizospheric soils by pyrosequencing, with Proteobacteria, Acidobacteria, and Bacteroidetes dominating the sequences of all samples. Bacterioidetes and Proteobacteria tended to increase, while Acidobacteria declined with increase in N addition rates. TM7 increased >5-fold in the high N addition rates, especially in S. krylovii rhizosphere. Nitrogen addition also decreased diversity of OTUs (operational taxonomic units), Shannon and Chao1 indices of rhizospheric microbes regardless of plant species. These results suggest that there were both similar but also specific changes in microbial communities of temperate steppes due to N deposition. These findings would contribute to our mechanistic understanding of impacts of N deposition on grassland ecosystem by linking changes in plant traits to their rhizospheric microbes-mediated processes. Frontiers Media S.A. 2015-08-12 /pmc/articles/PMC4533001/ /pubmed/26322024 http://dx.doi.org/10.3389/fmicb.2015.00789 Text en Copyright © 2015 Yang, Liu, Tian, Bai, Williams, Wang, Li and Zhang. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Yang, An
Liu, Nana
Tian, Qiuying
Bai, Wenming
Williams, Mark
Wang, Qibing
Li, Linghao
Zhang, Wen-Hao
Rhizosphere bacterial communities of dominant steppe plants shift in response to a gradient of simulated nitrogen deposition
title Rhizosphere bacterial communities of dominant steppe plants shift in response to a gradient of simulated nitrogen deposition
title_full Rhizosphere bacterial communities of dominant steppe plants shift in response to a gradient of simulated nitrogen deposition
title_fullStr Rhizosphere bacterial communities of dominant steppe plants shift in response to a gradient of simulated nitrogen deposition
title_full_unstemmed Rhizosphere bacterial communities of dominant steppe plants shift in response to a gradient of simulated nitrogen deposition
title_short Rhizosphere bacterial communities of dominant steppe plants shift in response to a gradient of simulated nitrogen deposition
title_sort rhizosphere bacterial communities of dominant steppe plants shift in response to a gradient of simulated nitrogen deposition
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4533001/
https://www.ncbi.nlm.nih.gov/pubmed/26322024
http://dx.doi.org/10.3389/fmicb.2015.00789
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