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Definition of Eight Mulberry Species in the Genus Morus by Internal Transcribed Spacer-Based Phylogeny

Mulberry, belonging to the order Rosales, family Moraceae, and genus Morus, has received attention because of both its economic and medicinal value, as well as for its important ecological function. The genus Morus has a worldwide distribution, however, its taxonomy remains complex and disputed. Man...

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Detalles Bibliográficos
Autores principales: Zeng, Qiwei, Chen, Hongyu, Zhang, Chao, Han, Minjing, Li, Tian, Qi, Xiwu, Xiang, Zhonghuai, He, Ningjia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4534381/
https://www.ncbi.nlm.nih.gov/pubmed/26266951
http://dx.doi.org/10.1371/journal.pone.0135411
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author Zeng, Qiwei
Chen, Hongyu
Zhang, Chao
Han, Minjing
Li, Tian
Qi, Xiwu
Xiang, Zhonghuai
He, Ningjia
author_facet Zeng, Qiwei
Chen, Hongyu
Zhang, Chao
Han, Minjing
Li, Tian
Qi, Xiwu
Xiang, Zhonghuai
He, Ningjia
author_sort Zeng, Qiwei
collection PubMed
description Mulberry, belonging to the order Rosales, family Moraceae, and genus Morus, has received attention because of both its economic and medicinal value, as well as for its important ecological function. The genus Morus has a worldwide distribution, however, its taxonomy remains complex and disputed. Many studies have attempted to classify Morus species, resulting in varied numbers of designated Morus spp. To address this issue, we used information from internal transcribed spacer (ITS) genetic sequences to study the taxonomy of all the members of generally accepted genus Morus. We found that intraspecific 5.8S rRNA sequences were identical but that interspecific 5.8S sequences were diverse. M. alba and M. notabilis showed the shortest (215 bp) and the longest (233 bp) ITS1 sequence length, respectively. With the completion of the mulberry genome, we could identify single nucleotide polymorphisms within the ITS locus in the M. notabilis genome. From reconstruction of a phylogenetic tree based on the complete ITS data, we propose that the Morus genus should be classified into eight species, including M. alba, M. nigra, M. notabilis, M. serrata, M. celtidifolia, M. insignis, M. rubra, and M. mesozygia. Furthermore, the classification of the ITS sequences of known interspecific hybrid clones into both paternal and maternal clades indicated that ITS variation was sufficient to distinguish interspecific hybrids in the genus Morus.
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spelling pubmed-45343812015-08-24 Definition of Eight Mulberry Species in the Genus Morus by Internal Transcribed Spacer-Based Phylogeny Zeng, Qiwei Chen, Hongyu Zhang, Chao Han, Minjing Li, Tian Qi, Xiwu Xiang, Zhonghuai He, Ningjia PLoS One Research Article Mulberry, belonging to the order Rosales, family Moraceae, and genus Morus, has received attention because of both its economic and medicinal value, as well as for its important ecological function. The genus Morus has a worldwide distribution, however, its taxonomy remains complex and disputed. Many studies have attempted to classify Morus species, resulting in varied numbers of designated Morus spp. To address this issue, we used information from internal transcribed spacer (ITS) genetic sequences to study the taxonomy of all the members of generally accepted genus Morus. We found that intraspecific 5.8S rRNA sequences were identical but that interspecific 5.8S sequences were diverse. M. alba and M. notabilis showed the shortest (215 bp) and the longest (233 bp) ITS1 sequence length, respectively. With the completion of the mulberry genome, we could identify single nucleotide polymorphisms within the ITS locus in the M. notabilis genome. From reconstruction of a phylogenetic tree based on the complete ITS data, we propose that the Morus genus should be classified into eight species, including M. alba, M. nigra, M. notabilis, M. serrata, M. celtidifolia, M. insignis, M. rubra, and M. mesozygia. Furthermore, the classification of the ITS sequences of known interspecific hybrid clones into both paternal and maternal clades indicated that ITS variation was sufficient to distinguish interspecific hybrids in the genus Morus. Public Library of Science 2015-08-12 /pmc/articles/PMC4534381/ /pubmed/26266951 http://dx.doi.org/10.1371/journal.pone.0135411 Text en © 2015 Zeng et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Zeng, Qiwei
Chen, Hongyu
Zhang, Chao
Han, Minjing
Li, Tian
Qi, Xiwu
Xiang, Zhonghuai
He, Ningjia
Definition of Eight Mulberry Species in the Genus Morus by Internal Transcribed Spacer-Based Phylogeny
title Definition of Eight Mulberry Species in the Genus Morus by Internal Transcribed Spacer-Based Phylogeny
title_full Definition of Eight Mulberry Species in the Genus Morus by Internal Transcribed Spacer-Based Phylogeny
title_fullStr Definition of Eight Mulberry Species in the Genus Morus by Internal Transcribed Spacer-Based Phylogeny
title_full_unstemmed Definition of Eight Mulberry Species in the Genus Morus by Internal Transcribed Spacer-Based Phylogeny
title_short Definition of Eight Mulberry Species in the Genus Morus by Internal Transcribed Spacer-Based Phylogeny
title_sort definition of eight mulberry species in the genus morus by internal transcribed spacer-based phylogeny
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4534381/
https://www.ncbi.nlm.nih.gov/pubmed/26266951
http://dx.doi.org/10.1371/journal.pone.0135411
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