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Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines

The role of Mithramycin as an anticancer drug has been well studied. Sarcoma is a type of cancer arising from cells of mesenchymal origin. Though incidence of sarcoma is not of significant percentage, it becomes vital to understand the role of Mithramycin in controlling tumor progression of sarcoma....

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Autores principales: Kulkarni, Kirti K., Bankar, Kiran Gopinath, Shukla, Rohit Nandan, Das, Chandrima, Banerjee, Amrita, Dasgupta, Dipak, Vasudevan, Madavan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4535529/
https://www.ncbi.nlm.nih.gov/pubmed/26484141
http://dx.doi.org/10.1016/j.gdata.2014.11.001
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author Kulkarni, Kirti K.
Bankar, Kiran Gopinath
Shukla, Rohit Nandan
Das, Chandrima
Banerjee, Amrita
Dasgupta, Dipak
Vasudevan, Madavan
author_facet Kulkarni, Kirti K.
Bankar, Kiran Gopinath
Shukla, Rohit Nandan
Das, Chandrima
Banerjee, Amrita
Dasgupta, Dipak
Vasudevan, Madavan
author_sort Kulkarni, Kirti K.
collection PubMed
description The role of Mithramycin as an anticancer drug has been well studied. Sarcoma is a type of cancer arising from cells of mesenchymal origin. Though incidence of sarcoma is not of significant percentage, it becomes vital to understand the role of Mithramycin in controlling tumor progression of sarcoma. In this article, we have analyzed the global gene expression profile changes induced by Mithramycin in two different sarcoma lines from whole genome gene expression profiling microarray data. We have found that the primary mode of action of Mithramycin is by global repression of key cellular processes and gene families like phosphoproteins, kinases, alternative splicing, regulation of transcription, DNA binding, regulation of histone acetylation, negative regulation of gene expression, chromosome organization or chromatin assembly and cytoskeleton.
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spelling pubmed-45355292015-10-19 Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines Kulkarni, Kirti K. Bankar, Kiran Gopinath Shukla, Rohit Nandan Das, Chandrima Banerjee, Amrita Dasgupta, Dipak Vasudevan, Madavan Genom Data Data in Brief The role of Mithramycin as an anticancer drug has been well studied. Sarcoma is a type of cancer arising from cells of mesenchymal origin. Though incidence of sarcoma is not of significant percentage, it becomes vital to understand the role of Mithramycin in controlling tumor progression of sarcoma. In this article, we have analyzed the global gene expression profile changes induced by Mithramycin in two different sarcoma lines from whole genome gene expression profiling microarray data. We have found that the primary mode of action of Mithramycin is by global repression of key cellular processes and gene families like phosphoproteins, kinases, alternative splicing, regulation of transcription, DNA binding, regulation of histone acetylation, negative regulation of gene expression, chromosome organization or chromatin assembly and cytoskeleton. Elsevier 2014-11-08 /pmc/articles/PMC4535529/ /pubmed/26484141 http://dx.doi.org/10.1016/j.gdata.2014.11.001 Text en © 2014 The Authors http://creativecommons.org/licenses/by/3.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Data in Brief
Kulkarni, Kirti K.
Bankar, Kiran Gopinath
Shukla, Rohit Nandan
Das, Chandrima
Banerjee, Amrita
Dasgupta, Dipak
Vasudevan, Madavan
Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines
title Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines
title_full Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines
title_fullStr Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines
title_full_unstemmed Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines
title_short Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines
title_sort global gene expression profiling data analysis reveals key gene families and biological processes inhibited by mithramycin in sarcoma cell lines
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4535529/
https://www.ncbi.nlm.nih.gov/pubmed/26484141
http://dx.doi.org/10.1016/j.gdata.2014.11.001
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