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Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines
The role of Mithramycin as an anticancer drug has been well studied. Sarcoma is a type of cancer arising from cells of mesenchymal origin. Though incidence of sarcoma is not of significant percentage, it becomes vital to understand the role of Mithramycin in controlling tumor progression of sarcoma....
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4535529/ https://www.ncbi.nlm.nih.gov/pubmed/26484141 http://dx.doi.org/10.1016/j.gdata.2014.11.001 |
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author | Kulkarni, Kirti K. Bankar, Kiran Gopinath Shukla, Rohit Nandan Das, Chandrima Banerjee, Amrita Dasgupta, Dipak Vasudevan, Madavan |
author_facet | Kulkarni, Kirti K. Bankar, Kiran Gopinath Shukla, Rohit Nandan Das, Chandrima Banerjee, Amrita Dasgupta, Dipak Vasudevan, Madavan |
author_sort | Kulkarni, Kirti K. |
collection | PubMed |
description | The role of Mithramycin as an anticancer drug has been well studied. Sarcoma is a type of cancer arising from cells of mesenchymal origin. Though incidence of sarcoma is not of significant percentage, it becomes vital to understand the role of Mithramycin in controlling tumor progression of sarcoma. In this article, we have analyzed the global gene expression profile changes induced by Mithramycin in two different sarcoma lines from whole genome gene expression profiling microarray data. We have found that the primary mode of action of Mithramycin is by global repression of key cellular processes and gene families like phosphoproteins, kinases, alternative splicing, regulation of transcription, DNA binding, regulation of histone acetylation, negative regulation of gene expression, chromosome organization or chromatin assembly and cytoskeleton. |
format | Online Article Text |
id | pubmed-4535529 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-45355292015-10-19 Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines Kulkarni, Kirti K. Bankar, Kiran Gopinath Shukla, Rohit Nandan Das, Chandrima Banerjee, Amrita Dasgupta, Dipak Vasudevan, Madavan Genom Data Data in Brief The role of Mithramycin as an anticancer drug has been well studied. Sarcoma is a type of cancer arising from cells of mesenchymal origin. Though incidence of sarcoma is not of significant percentage, it becomes vital to understand the role of Mithramycin in controlling tumor progression of sarcoma. In this article, we have analyzed the global gene expression profile changes induced by Mithramycin in two different sarcoma lines from whole genome gene expression profiling microarray data. We have found that the primary mode of action of Mithramycin is by global repression of key cellular processes and gene families like phosphoproteins, kinases, alternative splicing, regulation of transcription, DNA binding, regulation of histone acetylation, negative regulation of gene expression, chromosome organization or chromatin assembly and cytoskeleton. Elsevier 2014-11-08 /pmc/articles/PMC4535529/ /pubmed/26484141 http://dx.doi.org/10.1016/j.gdata.2014.11.001 Text en © 2014 The Authors http://creativecommons.org/licenses/by/3.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Data in Brief Kulkarni, Kirti K. Bankar, Kiran Gopinath Shukla, Rohit Nandan Das, Chandrima Banerjee, Amrita Dasgupta, Dipak Vasudevan, Madavan Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines |
title | Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines |
title_full | Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines |
title_fullStr | Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines |
title_full_unstemmed | Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines |
title_short | Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines |
title_sort | global gene expression profiling data analysis reveals key gene families and biological processes inhibited by mithramycin in sarcoma cell lines |
topic | Data in Brief |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4535529/ https://www.ncbi.nlm.nih.gov/pubmed/26484141 http://dx.doi.org/10.1016/j.gdata.2014.11.001 |
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