Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India

We report Metagenome from the saline desert soil sample of Little Rann of Kutch, Gujarat State, India. Metagenome consisted of 633,760 sequences with size 141,307,202 bp and 56% G + C content. Metagenome sequence data are available at EBI under EBI Metagenomics database with accession no. ERP005612....

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Detalles Bibliográficos
Autores principales: Patel, Rajesh, Mevada, Vishal, Prajapati, Dhaval, Dudhagara, Pravin, Koringa, Prakash, Joshi, C.G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
Data in Brief
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4535752/
https://www.ncbi.nlm.nih.gov/pubmed/26484162
http://dx.doi.org/10.1016/j.gdata.2015.01.003
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author Patel, Rajesh
Mevada, Vishal
Prajapati, Dhaval
Dudhagara, Pravin
Koringa, Prakash
Joshi, C.G.
author_facet Patel, Rajesh
Mevada, Vishal
Prajapati, Dhaval
Dudhagara, Pravin
Koringa, Prakash
Joshi, C.G.
author_sort Patel, Rajesh
collection PubMed
description We report Metagenome from the saline desert soil sample of Little Rann of Kutch, Gujarat State, India. Metagenome consisted of 633,760 sequences with size 141,307,202 bp and 56% G + C content. Metagenome sequence data are available at EBI under EBI Metagenomics database with accession no. ERP005612. Community metagenomics revealed total 1802 species belonged to 43 different phyla with dominating Marinobacter (48.7%) and Halobacterium (4.6%) genus in bacterial and archaeal domain respectively. Remarkably, 18.2% sequences in a poorly characterized group and 4% gene for various stress responses along with versatile presence of commercial enzyme were evident in a functional metagenome analysis.
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spelling pubmed-45357522015-10-19 Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India Patel, Rajesh Mevada, Vishal Prajapati, Dhaval Dudhagara, Pravin Koringa, Prakash Joshi, C.G. Genom Data Data in Brief We report Metagenome from the saline desert soil sample of Little Rann of Kutch, Gujarat State, India. Metagenome consisted of 633,760 sequences with size 141,307,202 bp and 56% G + C content. Metagenome sequence data are available at EBI under EBI Metagenomics database with accession no. ERP005612. Community metagenomics revealed total 1802 species belonged to 43 different phyla with dominating Marinobacter (48.7%) and Halobacterium (4.6%) genus in bacterial and archaeal domain respectively. Remarkably, 18.2% sequences in a poorly characterized group and 4% gene for various stress responses along with versatile presence of commercial enzyme were evident in a functional metagenome analysis. Elsevier 2015-01-15 /pmc/articles/PMC4535752/ /pubmed/26484162 http://dx.doi.org/10.1016/j.gdata.2015.01.003 Text en © 2015 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data in Brief
Patel, Rajesh
Mevada, Vishal
Prajapati, Dhaval
Dudhagara, Pravin
Koringa, Prakash
Joshi, C.G.
Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India
title Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India
title_full Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India
title_fullStr Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India
title_full_unstemmed Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India
title_short Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India
title_sort metagenomic sequence of saline desert microbiota from wild ass sanctuary, little rann of kutch, gujarat, india
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4535752/
https://www.ncbi.nlm.nih.gov/pubmed/26484162
http://dx.doi.org/10.1016/j.gdata.2015.01.003
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