Genome sequencing and annotation of Amycolatopsis vancoresmycina strain DSM 44592(T)

We report the 9.0-Mb draft genome of Amycolatopsis vancoresmycina strain DSM 44592(T), isolated from Indian soil sample; produces antibiotic vancoresmycin. Draft genome of strain DSM44592T consists of 9,037,069 bp with a G+C content of 71.79% and 8340 predicted protein coding genes and 57 RNAs. RAST...

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Detalles Bibliográficos
Autores principales: Kaur, Navjot, Kumar, Shailesh, Mayilraj, Shanmugam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2013
Materias:
Data in Brief
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4535985/
https://www.ncbi.nlm.nih.gov/pubmed/26484057
http://dx.doi.org/10.1016/j.gdata.2013.10.006
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author Kaur, Navjot
Kumar, Shailesh
Mayilraj, Shanmugam
author_facet Kaur, Navjot
Kumar, Shailesh
Mayilraj, Shanmugam
author_sort Kaur, Navjot
collection PubMed
description We report the 9.0-Mb draft genome of Amycolatopsis vancoresmycina strain DSM 44592(T), isolated from Indian soil sample; produces antibiotic vancoresmycin. Draft genome of strain DSM44592T consists of 9,037,069 bp with a G+C content of 71.79% and 8340 predicted protein coding genes and 57 RNAs. RAST annotation indicates that strains Streptomyces sp. AA4 (score 521), Saccharomonospora viridis DSM 43017 (score 400) and Actinosynnema mirum DSM 43827 (score 372) are the closest neighbors of the strain DSM 44592(T).
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spelling pubmed-45359852015-10-19 Genome sequencing and annotation of Amycolatopsis vancoresmycina strain DSM 44592(T) Kaur, Navjot Kumar, Shailesh Mayilraj, Shanmugam Genom Data Data in Brief We report the 9.0-Mb draft genome of Amycolatopsis vancoresmycina strain DSM 44592(T), isolated from Indian soil sample; produces antibiotic vancoresmycin. Draft genome of strain DSM44592T consists of 9,037,069 bp with a G+C content of 71.79% and 8340 predicted protein coding genes and 57 RNAs. RAST annotation indicates that strains Streptomyces sp. AA4 (score 521), Saccharomonospora viridis DSM 43017 (score 400) and Actinosynnema mirum DSM 43827 (score 372) are the closest neighbors of the strain DSM 44592(T). Elsevier 2013-11-27 /pmc/articles/PMC4535985/ /pubmed/26484057 http://dx.doi.org/10.1016/j.gdata.2013.10.006 Text en © 2013 The Authors http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/3.0/).
spellingShingle Data in Brief
Kaur, Navjot
Kumar, Shailesh
Mayilraj, Shanmugam
Genome sequencing and annotation of Amycolatopsis vancoresmycina strain DSM 44592(T)
title Genome sequencing and annotation of Amycolatopsis vancoresmycina strain DSM 44592(T)
title_full Genome sequencing and annotation of Amycolatopsis vancoresmycina strain DSM 44592(T)
title_fullStr Genome sequencing and annotation of Amycolatopsis vancoresmycina strain DSM 44592(T)
title_full_unstemmed Genome sequencing and annotation of Amycolatopsis vancoresmycina strain DSM 44592(T)
title_short Genome sequencing and annotation of Amycolatopsis vancoresmycina strain DSM 44592(T)
title_sort genome sequencing and annotation of amycolatopsis vancoresmycina strain dsm 44592(t)
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4535985/
https://www.ncbi.nlm.nih.gov/pubmed/26484057
http://dx.doi.org/10.1016/j.gdata.2013.10.006
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